accessing "low-level" parameters from the Channel

NMODL and the Channel Builder.
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Brad

accessing "low-level" parameters from the Channel

Post by Brad »

Is it possible to access from hoc the "low-level" parameters in the Channel Builder? For example, when using a channel model with a HH-style scheme, is there a way to reference A, k, and d from

Code: Select all

A*x/(1 - exp(-x)) where x = k*(v - d)

or

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A*exp(k*(v-d))
etc, for each of the gating variables?

I want to construct a channel whose activation v_half and slope varies with location. The most apparent thing to me would be to manipulate the parameter values for alpha_m and beta_m in a forall/for(x) construct, but I haven't found documentation that suggests how to do this. I've looked through some session files, but nothing jumps out at me as the answer.
ted
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Post by ted »

You need to enable, and exploit, the ChannelBuilder's "aliases" feature.
See my entry
Posted: Sat Feb 18, 2006 9:30 pm Post subject: Channel Builder parameter aliases
in this discussion thread
https://www.neuron.yale.edu/phpBB2/viewtopic.php?t=296
for more information.
Brad

Post by Brad »

Thanks for the quick reply, Ted. That looks like exactly what I need. I scanned through most of the posts in the "Adding new mechs..." forum category. I must not have thought "nsingle" (the title of that particular post) was relevant to my topic, and I didn't know to search for "alisases."
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