NEURON installation and configuration

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Topics: 130

130 Topics

777 Posts

Last post Re: Syntax Warning
by ramcdougal View the latest post
Mon Jun 01, 2020 1:44 pm
MSWin
Topics: 126

126 Topics

702 Posts

Last post Re: Windows 10, Permission De…
by ramcdougal View the latest post
Sun Jun 07, 2020 5:41 pm
UNIX/Linux
Topics: 186

186 Topics

826 Posts

Last post Re: .mod files compilation is…
by mmushtaq View the latest post
Mon Jun 08, 2020 4:25 am

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If you can't compile mod files . . .

Last post by hines « Tue Jan 06, 2015 1:11 am
Replies: 15
by ted » Tue Aug 18, 2009 12:25 am
1

2
15 Replies

28772 Views

Last post by hines
Tue Jan 06, 2015 1:11 am
.mod files compilation issues

Last post by mmushtaq « Mon Jun 08, 2020 4:25 am
Replies: 4
by mmushtaq » Thu Jun 04, 2020 8:37 am

4 Replies

1052 Views

Last post by mmushtaq
Mon Jun 08, 2020 4:25 am
Windows 10, Permission Denied

Last post by ramcdougal « Sun Jun 07, 2020 5:41 pm
Replies: 1
by n74jw » Fri Jun 05, 2020 5:57 pm

1 Replies

258 Views

Last post by ramcdougal
Sun Jun 07, 2020 5:41 pm
Open MPI error with h.nrnmpi_init(): mca_base_component_repository_open: unable to open mca_patcher_overwrite

Last post by hines « Wed Jun 03, 2020 9:08 am
Replies: 7
by tony-azevedo » Sat May 30, 2020 10:04 am

7 Replies

303 Views

Last post by hines
Wed Jun 03, 2020 9:08 am
Syntax Warning

Last post by ramcdougal « Mon Jun 01, 2020 1:44 pm
Replies: 1
by ryang » Fri May 29, 2020 2:18 pm

1 Replies

237 Views

Last post by ramcdougal
Mon Jun 01, 2020 1:44 pm
Running hoc files from sublime text 3

Last post by ryang « Fri May 29, 2020 1:50 pm
Replies: 1
by ryang » Thu May 28, 2020 5:05 pm

1 Replies

140 Views

Last post by ryang
Fri May 29, 2020 1:50 pm
NRNGUI not working from command line after switch to zsh

Last post by ryang « Wed May 27, 2020 5:22 pm
Replies: 10
by sbrich » Fri Mar 13, 2020 3:24 pm

10 Replies

1167 Views

Last post by ryang
Wed May 27, 2020 5:22 pm
help installing on WSL

Last post by ramcdougal « Fri May 22, 2020 8:32 pm
Replies: 1
by jpduf » Fri May 22, 2020 12:11 pm

1 Replies

194 Views

Last post by ramcdougal
Fri May 22, 2020 8:32 pm
OpenMP based parallelism in NEURON

Last post by itaru « Fri May 15, 2020 1:05 am

by itaru » Fri May 15, 2020 1:05 am

0 Replies

235 Views

Last post by itaru
Fri May 15, 2020 1:05 am
Installation Help: Fail to "import neuron" in Python

Last post by byronprice « Thu Mar 26, 2020 11:18 am
Replies: 4
by byronprice » Thu Mar 19, 2020 12:42 pm

4 Replies

747 Views

Last post by byronprice
Thu Mar 26, 2020 11:18 am
Failed to run neuron inside virtual environment in Ubuntu18 with Anaconda (PATH issue?)

Last post by nicholasmg « Sun Mar 01, 2020 1:15 pm
Replies: 3
by zoccoler » Tue Jan 14, 2020 2:20 pm

3 Replies

1199 Views

Last post by nicholasmg
Sun Mar 01, 2020 1:15 pm
How do I collect data for plots without IV

Last post by ramcdougal « Wed Feb 19, 2020 5:13 pm
Replies: 4
by itaru » Mon Feb 17, 2020 3:50 am

4 Replies

582 Views

Last post by ramcdougal
Wed Feb 19, 2020 5:13 pm
NEURON installation on macOS Catalina

Last post by Lopreore « Mon Feb 10, 2020 2:47 pm
Replies: 8
by kellihancock » Fri Dec 20, 2019 9:01 am

8 Replies

2311 Views

Last post by Lopreore
Mon Feb 10, 2020 2:47 pm
Which environmental variables do I need to setup for NEURON to work after rpm installation without sudo with cpio

Last post by hines « Mon Dec 23, 2019 8:34 am
Replies: 1
by ziemek » Thu Dec 19, 2019 12:43 pm

1 Replies

624 Views

Last post by hines
Mon Dec 23, 2019 8:34 am
CentOS with RxD and NEURON build from source

Last post by ramcdougal « Tue Dec 17, 2019 5:13 pm
Replies: 1
by ziemek » Tue Dec 17, 2019 11:54 am

1 Replies

556 Views

Last post by ramcdougal
Tue Dec 17, 2019 5:13 pm
NEURON not working properly after update to Catalina and major troubleshooting!

Last post by sbrich « Thu Nov 21, 2019 1:37 pm
Replies: 3
by sbrich » Thu Nov 21, 2019 12:36 pm

3 Replies

993 Views

Last post by sbrich
Thu Nov 21, 2019 1:37 pm
nrnivmodl missing -lX11

Last post by RobinDS « Wed Nov 20, 2019 3:30 pm
Replies: 1
by RobinDS » Wed Nov 20, 2019 3:10 pm

1 Replies

717 Views

Last post by RobinDS
Wed Nov 20, 2019 3:30 pm
No module named hoc37

Last post by RobinDS « Fri Nov 15, 2019 7:22 am
Replies: 11
by RBJ » Sun Apr 21, 2019 10:15 am

11 Replies

5337 Views

Last post by RobinDS
Fri Nov 15, 2019 7:22 am
Problem importing NEURON in python

Last post by shhschen « Fri Nov 08, 2019 10:10 pm
Replies: 2
by hadas.manor » Sun Oct 13, 2019 8:08 am

2 Replies

1111 Views

Last post by shhschen
Fri Nov 08, 2019 10:10 pm
PyNeuron + Ubuntu + Python 3.6

Last post by hines « Fri Nov 01, 2019 9:17 am
Replies: 5
by ziemek » Thu Oct 31, 2019 10:05 am

5 Replies

2013 Views

Last post by hines
Fri Nov 01, 2019 9:17 am
Downloading NEURON5.9

Last post by ted « Tue Sep 24, 2019 11:38 am
Replies: 1
by Sun Xiaoqing » Tue Sep 24, 2019 3:28 am

1 Replies

1831 Views

Last post by ted
Tue Sep 24, 2019 11:38 am
Cannot find executable python3 or python

Last post by Sun Xiaoqing « Sun Sep 22, 2019 12:19 am
Replies: 2
by Sun Xiaoqing » Mon Sep 16, 2019 10:54 pm

2 Replies

1805 Views

Last post by Sun Xiaoqing
Sun Sep 22, 2019 12:19 am
cygwin vs msys file path changes, Windows NEURON version

Last post by ted « Sat Sep 07, 2019 3:37 pm
Replies: 1
by JimH » Thu Sep 05, 2019 11:40 pm

1 Replies

920 Views

Last post by ted
Sat Sep 07, 2019 3:37 pm
Installation problem Neuron

Last post by wvangeit « Tue Aug 20, 2019 8:13 am
Replies: 36
by neuronakash » Mon Sep 10, 2018 4:12 pm
1

2

3
36 Replies

22009 Views

Last post by wvangeit
Tue Aug 20, 2019 8:13 am
code is incompatible with this neuron version

Last post by ted « Thu Aug 08, 2019 10:23 am
Replies: 1
by LauraD » Wed Aug 07, 2019 5:42 pm

1 Replies

1023 Views

Last post by ted
Thu Aug 08, 2019 10:23 am
Can't load from neuron.rxd.morphology

Last post by ramcdougal « Mon Jul 01, 2019 11:12 am
Replies: 1
by Elishai » Sun Jun 30, 2019 6:46 am

1 Replies

1148 Views

Last post by ramcdougal
Mon Jul 01, 2019 11:12 am
Problem installing on cluster

Last post by ted « Thu Jun 27, 2019 10:29 am
Replies: 2
by jtg374 » Tue Jun 25, 2019 11:17 pm

2 Replies

1970 Views

Last post by ted
Thu Jun 27, 2019 10:29 am
Compiling script fails with newer NEURON versions due to $N

Last post by MBeining « Thu May 30, 2019 5:22 am
Replies: 2
by MBeining » Sun May 26, 2019 5:26 am

2 Replies

1682 Views

Last post by MBeining
Thu May 30, 2019 5:22 am
Installing NEURON on XUBUNTU

Last post by analkumar2 « Fri May 03, 2019 4:45 am
Replies: 6
by mferran1 » Sun Dec 09, 2007 1:14 pm

6 Replies

5491 Views

Last post by analkumar2
Fri May 03, 2019 4:45 am
Installing Neuron on macOS Mojave

Last post by bschneiders « Mon Apr 29, 2019 4:53 pm
Replies: 5
by bschneiders » Mon Apr 22, 2019 12:22 pm

5 Replies

2670 Views

Last post by bschneiders
Mon Apr 29, 2019 4:53 pm
mknrndll not finding nrnunits.lib

Last post by patoorio « Mon Apr 29, 2019 9:21 am
Replies: 6
by patoorio » Tue Apr 23, 2019 9:14 pm

6 Replies

2540 Views

Last post by patoorio
Mon Apr 29, 2019 9:21 am
Neuron File Association

Last post by ted « Thu Mar 28, 2019 1:07 pm
Replies: 1
by DWilliams » Thu Mar 28, 2019 10:52 am

1 Replies

2320 Views

Last post by ted
Thu Mar 28, 2019 1:07 pm
downloading neuron on windows

Last post by ted « Fri Mar 01, 2019 10:23 am
Replies: 3
by neuronakash » Mon Sep 17, 2018 10:44 pm

3 Replies

4404 Views

Last post by ted
Fri Mar 01, 2019 10:23 am
Windows 10 install problem. Path issue?

Last post by ramcdougal « Fri Mar 01, 2019 10:00 am
Replies: 1
by Bill Connelly » Wed Feb 27, 2019 5:54 pm

1 Replies

1894 Views

Last post by ramcdougal
Fri Mar 01, 2019 10:00 am
Trouble Compiling Mod2 Files on Virtual Environment

Last post by ted « Mon Feb 11, 2019 2:09 pm
Replies: 1
by tmazing » Wed Feb 06, 2019 11:04 pm

1 Replies

1715 Views

Last post by ted
Mon Feb 11, 2019 2:09 pm
nrnivmodl compiling in Linux

Last post by ted « Mon Jan 28, 2019 10:35 pm
Replies: 8
by dzocchi » Fri Jun 29, 2012 7:20 pm

8 Replies

13025 Views

Last post by ted
Mon Jan 28, 2019 10:35 pm
Which version of Neuron works with Python 2.7?

Last post by ted « Tue Dec 25, 2018 4:34 pm
Replies: 1
by Yaeger » Mon Dec 24, 2018 1:10 pm

1 Replies

1900 Views

Last post by ted
Tue Dec 25, 2018 4:34 pm
Windows 10 install problem

Last post by hines « Thu Dec 20, 2018 3:09 pm
Replies: 2
by neuralian » Wed Nov 21, 2018 8:04 pm

2 Replies

3868 Views

Last post by hines
Thu Dec 20, 2018 3:09 pm
BUG.am: error: 'install.sh' is an anachronism; use 'install-sh' instead

Last post by selfdestructo « Thu Dec 06, 2018 4:25 pm
Replies: 1
by selfdestructo » Tue Dec 04, 2018 5:39 am

1 Replies

1976 Views

Last post by selfdestructo
Thu Dec 06, 2018 4:25 pm
Segmentation fault with alpha version of 7.6

Last post by bschneiders « Tue Nov 27, 2018 12:48 pm

by bschneiders » Tue Nov 27, 2018 12:48 pm

0 Replies

2723 Views

Last post by bschneiders
Tue Nov 27, 2018 12:48 pm
Compile Neuron

Last post by mzenker « Fri Oct 26, 2018 10:39 am
Replies: 5
by mzenker » Tue Oct 23, 2018 11:04 am

5 Replies

3700 Views

Last post by mzenker
Fri Oct 26, 2018 10:39 am
Error when downloading on windows

Last post by ted « Wed Oct 24, 2018 9:56 am
Replies: 1
by cnewman3 » Wed Oct 24, 2018 8:12 am

1 Replies

2029 Views

Last post by ted
Wed Oct 24, 2018 9:56 am
Either nrngui or conda-forge neuron work, but not both?

Last post by ssp « Thu Oct 11, 2018 7:36 am
Replies: 6
by ssp » Fri Oct 05, 2018 7:15 am

6 Replies

5006 Views

Last post by ssp
Thu Oct 11, 2018 7:36 am
NEURON 7.6.2 Source Code Compilation and Python versions

Last post by ted « Tue Sep 25, 2018 10:51 am
Replies: 4
by Darshan » Tue Aug 21, 2018 4:55 am

4 Replies

4040 Views

Last post by ted
Tue Sep 25, 2018 10:51 am
Running nrngui on Ubuntu

Last post by ted « Fri Sep 21, 2018 10:44 am
Replies: 1
by neuronakash » Thu Sep 20, 2018 1:41 pm

1 Replies

2530 Views

Last post by ted
Fri Sep 21, 2018 10:44 am
Problems with 'make' when trying to install NEURON with MPI+Python (Ubuntu 16.04)

Last post by acnavasolive « Fri Sep 21, 2018 5:05 am
Replies: 25
by acnavasolive » Wed Sep 12, 2018 7:34 am
1

2
25 Replies

20558 Views

Last post by acnavasolive
Fri Sep 21, 2018 5:05 am
No display environment available

Last post by ted « Wed Sep 12, 2018 4:22 pm
Replies: 1
by bspald1 » Wed Sep 12, 2018 10:16 am

1 Replies

2325 Views

Last post by ted
Wed Sep 12, 2018 4:22 pm
upgrade problem in Ubuntu [SOLVED]

Last post by fabien tell « Thu Aug 09, 2018 4:33 am
Replies: 3
by fabien tell » Wed Aug 08, 2018 5:34 am

3 Replies

3207 Views

Last post by fabien tell
Thu Aug 09, 2018 4:33 am
Precompiled NEURON 7.5 install on Sierra - not quite successful

Last post by ted « Sat Jul 28, 2018 6:02 pm
Replies: 2
by neuromau » Sat Jul 28, 2018 8:55 am

2 Replies

2574 Views

Last post by ted
Sat Jul 28, 2018 6:02 pm
How to create sawtooth current with ICamp?

Last post by ted « Thu Jul 26, 2018 9:53 pm
Replies: 1
by shuting » Thu Jul 26, 2018 1:42 pm

1 Replies

2174 Views

Last post by ted
Thu Jul 26, 2018 9:53 pm

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