Parallel NEURON

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NSG provides free access to supercomputers

Last post by ted « Thu Mar 20, 2014 11:01 am

by ted » Thu Mar 20, 2014 11:01 am

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Last post by ted
Thu Mar 20, 2014 11:01 am

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Multithreaded simulation Q & A

Last post by ted « Thu Sep 18, 2008 10:41 pm

by ted » Thu Sep 18, 2008 10:41 pm

0 Replies

16731 Views

Last post by ted
Thu Sep 18, 2008 10:41 pm
Do you really have n usable processors?

Last post by hines « Mon Oct 15, 2007 10:53 am

by hines » Mon Oct 15, 2007 10:53 am

0 Replies

12719 Views

Last post by hines
Mon Oct 15, 2007 10:53 am
Bulletin-Style Grid-Like Simulations: Indexing Getting Mixed Up

Last post by ted « Mon May 13, 2019 7:00 pm
Replies: 4
by agmccrei » Sun May 12, 2019 1:23 pm

4 Replies

210 Views

Last post by ted
Mon May 13, 2019 7:00 pm
multithreads for parallel NEURON code

Last post by breakwave922 « Fri Mar 01, 2019 3:54 pm

by breakwave922 » Fri Mar 01, 2019 3:54 pm

0 Replies

693 Views

Last post by breakwave922
Fri Mar 01, 2019 3:54 pm
segmentation fault when recording specific time points into h.Vector

Last post by ted « Mon Nov 12, 2018 12:04 pm
Replies: 1
by rlindroos » Mon Nov 12, 2018 10:43 am

1 Replies

891 Views

Last post by ted
Mon Nov 12, 2018 12:04 pm
How to execute CoreNEURON with GPU?

Last post by Jeremy « Thu Aug 09, 2018 3:59 am
Replies: 11
by john.gwak » Fri Jul 27, 2018 12:20 am

11 Replies

2473 Views

Last post by Jeremy
Thu Aug 09, 2018 3:59 am
Parallel simulations of ephaptic connections

Last post by mcapllonchj « Wed Jul 25, 2018 10:12 am
Replies: 7
by mcapllonchj » Tue Mar 13, 2018 1:55 pm

7 Replies

1319 Views

Last post by mcapllonchj
Wed Jul 25, 2018 10:12 am
Neuron parallel installation on Clusters

Last post by Rahul123 « Thu Jun 28, 2018 1:08 am

by Rahul123 » Thu Jun 28, 2018 1:08 am

0 Replies

1197 Views

Last post by Rahul123
Thu Jun 28, 2018 1:08 am
Stabilization Mechanism

Last post by ahmed.hamzah « Sun Jun 24, 2018 1:34 pm
Replies: 9
by ahmed.hamzah » Mon Jun 18, 2018 1:43 pm

9 Replies

1523 Views

Last post by ahmed.hamzah
Sun Jun 24, 2018 1:34 pm
want_all_spikes recording from axon

Last post by bll5z6 « Tue Jun 19, 2018 3:15 pm
Replies: 2
by bll5z6 » Tue Jun 19, 2018 1:57 pm

2 Replies

706 Views

Last post by bll5z6
Tue Jun 19, 2018 3:15 pm
Network Parallelization

Last post by ted « Thu May 17, 2018 8:40 am
Replies: 5
by Krishna Chaitanya » Mon May 14, 2018 9:44 am

5 Replies

1035 Views

Last post by ted
Thu May 17, 2018 8:40 am
GPUs vs intel PHI coprocessor

Last post by ted « Mon Apr 16, 2018 2:06 pm
Replies: 1
by atknox » Mon Apr 16, 2018 12:54 pm

1 Replies

1055 Views

Last post by ted
Mon Apr 16, 2018 2:06 pm
parallelize nested loop

Last post by menica « Wed Mar 28, 2018 7:10 am
Replies: 7
by menica » Wed Mar 14, 2018 12:57 pm

7 Replies

2374 Views

Last post by menica
Wed Mar 28, 2018 7:10 am
Passing parameters using pack/post, etc.

Last post by aaronmil « Wed Jan 03, 2018 4:23 pm
Replies: 18
by JBall » Thu Oct 21, 2010 1:44 pm
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2
18 Replies

15195 Views

Last post by aaronmil
Wed Jan 03, 2018 4:23 pm
summation of matrix on different computer nodes

Last post by breakwave922 « Wed Nov 29, 2017 10:37 pm
Replies: 2
by breakwave922 » Sun Nov 19, 2017 3:27 am

2 Replies

9989 Views

Last post by breakwave922
Wed Nov 29, 2017 10:37 pm
mpiexec fails on linux

Last post by MBeining « Tue Nov 07, 2017 5:19 am
Replies: 1
by MBeining » Sun Nov 05, 2017 8:05 am

1 Replies

9557 Views

Last post by MBeining
Tue Nov 07, 2017 5:19 am
Neuron's mpiexec fails on Windows 10

Last post by MBeining « Sun Nov 05, 2017 6:22 am
Replies: 13
by MBeining » Tue Oct 24, 2017 2:13 pm

13 Replies

13718 Views

Last post by MBeining
Sun Nov 05, 2017 6:22 am
Parallel jobs fail after upgrading to Neuron version 7.5

Last post by hines « Wed Oct 18, 2017 7:14 pm
Replies: 3
by BlueBirdFlies » Mon Oct 16, 2017 4:02 pm

3 Replies

8593 Views

Last post by hines
Wed Oct 18, 2017 7:14 pm
A multi-gpu version of CoreNEURON

Last post by zyc « Tue Oct 17, 2017 1:55 am

by zyc » Tue Oct 17, 2017 1:55 am

0 Replies

12275 Views

Last post by zyc
Tue Oct 17, 2017 1:55 am
NetCon threshold and parallel context

Last post by MBeining « Thu Sep 14, 2017 8:24 am

by MBeining » Thu Sep 14, 2017 8:24 am

0 Replies

11957 Views

Last post by MBeining
Thu Sep 14, 2017 8:24 am
parallelized NEURON does not start with pnm.run()

Last post by MBeining « Tue Sep 12, 2017 10:06 am
Replies: 7
by MBeining » Thu Sep 07, 2017 6:39 am

7 Replies

8821 Views

Last post by MBeining
Tue Sep 12, 2017 10:06 am
Parallelization of a single cell

Last post by nikkip « Mon Sep 11, 2017 9:02 am
Replies: 7
by nikkip » Mon Sep 04, 2017 10:22 pm

7 Replies

8836 Views

Last post by nikkip
Mon Sep 11, 2017 9:02 am
Parameter sweep with distributed parallel network

Last post by ted « Fri Aug 04, 2017 11:02 am
Replies: 2
by pascal » Tue Jul 25, 2017 4:20 pm

2 Replies

5084 Views

Last post by ted
Fri Aug 04, 2017 11:02 am
How to build network model for coreNeuron

Last post by bremen « Sat Jun 03, 2017 4:16 pm
Replies: 24
by zyc » Tue Feb 21, 2017 2:58 am
1

2
24 Replies

13015 Views

Last post by bremen
Sat Jun 03, 2017 4:16 pm
Load balancing with heterogeneous morphologies and synapses

Last post by hines « Sat Apr 08, 2017 2:45 pm
Replies: 18
by iraikov » Tue Mar 21, 2017 4:29 pm
1

2
18 Replies

9240 Views

Last post by hines
Sat Apr 08, 2017 2:45 pm
Using Traub's parallel gap junction in Python

Last post by hines « Wed Mar 29, 2017 1:22 pm
Replies: 2
by pascal » Mon Mar 27, 2017 9:08 am

2 Replies

5324 Views

Last post by hines
Wed Mar 29, 2017 1:22 pm
Display time as the simulation progresses

Last post by ted « Fri Mar 03, 2017 11:46 am
Replies: 1
by shyam_u2 » Thu Mar 02, 2017 5:15 pm

1 Replies

4636 Views

Last post by ted
Fri Mar 03, 2017 11:46 am
Accessing ParallelContext() while in Python

Last post by agmccrei « Sun Feb 26, 2017 2:18 am
Replies: 2
by agmccrei » Thu Feb 23, 2017 5:36 pm

2 Replies

5074 Views

Last post by agmccrei
Sun Feb 26, 2017 2:18 am
bulletin board parallelization

Last post by ted « Tue Feb 14, 2017 6:08 pm
Replies: 1
by menica » Thu Feb 09, 2017 1:09 pm

1 Replies

4742 Views

Last post by ted
Tue Feb 14, 2017 6:08 pm
Using Multisplit on NSG

Last post by agmccrei « Mon Jan 16, 2017 10:43 pm
Replies: 2
by agmccrei » Mon Jan 02, 2017 6:51 pm

2 Replies

4964 Views

Last post by agmccrei
Mon Jan 16, 2017 10:43 pm
netcon enhancement

Last post by hines « Thu Dec 08, 2016 4:17 pm
Replies: 5
by vgoudar » Fri Dec 02, 2016 7:40 pm

5 Replies

5159 Views

Last post by hines
Thu Dec 08, 2016 4:17 pm
NEURON on GPUs?

Last post by sgratiy « Mon Jul 25, 2016 5:26 pm
Replies: 3
by catubc » Wed Jul 06, 2016 12:18 am

3 Replies

5404 Views

Last post by sgratiy
Mon Jul 25, 2016 5:26 pm
Number of spikes decrease in parallel run

Last post by Krishna Chaitanya « Mon Jun 06, 2016 4:11 am
Replies: 2
by Krishna Chaitanya » Mon Jun 06, 2016 12:09 am

2 Replies

4682 Views

Last post by Krishna Chaitanya
Mon Jun 06, 2016 4:11 am
How to transfer Calcium concentrations between two tasks

Last post by ted « Wed Jun 01, 2016 12:28 am
Replies: 7
by nancyShu » Fri May 27, 2016 4:12 am

7 Replies

5563 Views

Last post by ted
Wed Jun 01, 2016 12:28 am
Parallel neuron help!

Last post by nancyShu « Thu May 26, 2016 3:45 am
Replies: 2
by nancyShu » Wed May 25, 2016 11:24 am

2 Replies

5002 Views

Last post by nancyShu
Thu May 26, 2016 3:45 am
Connecting cells using pnm.nc_append function

Last post by ted « Mon Oct 12, 2015 2:57 pm
Replies: 1
by Krishna Chaitanya » Mon Oct 12, 2015 4:09 am

1 Replies

5182 Views

Last post by ted
Mon Oct 12, 2015 2:57 pm
Parallel Neuron Help! - BAD TERMINATION

Last post by Grado « Fri Sep 11, 2015 2:48 pm
Replies: 2
by Grado » Fri Sep 11, 2015 1:52 pm

2 Replies

5181 Views

Last post by Grado
Fri Sep 11, 2015 2:48 pm
A ring network with multithreading

Last post by ted « Tue Jul 14, 2015 12:39 pm
Replies: 26
by jackfolla » Wed Jul 07, 2010 10:24 am
1

2
26 Replies

15044 Views

Last post by ted
Tue Jul 14, 2015 12:39 pm
Pointer Vector warning - python NEURON running on clusters

Last post by hines « Wed May 27, 2015 3:21 pm
Replies: 1
by catubc » Wed May 27, 2015 11:31 am

1 Replies

5175 Views

Last post by hines
Wed May 27, 2015 3:21 pm
Recording synapse times for random input - parallel context

Last post by catubc « Mon May 18, 2015 10:10 pm
Replies: 2
by catubc » Wed May 13, 2015 2:07 pm

2 Replies

5176 Views

Last post by catubc
Mon May 18, 2015 10:10 pm
Dynamic load balancing

Last post by ted « Wed May 06, 2015 9:50 pm
Replies: 3
by sandeepb » Mon May 04, 2015 5:45 am

3 Replies

5310 Views

Last post by ted
Wed May 06, 2015 9:50 pm
Errors from Vecstim()

Last post by breakwave922 « Tue Jan 27, 2015 1:11 am
Replies: 9
by breakwave922 » Sun Jan 25, 2015 6:05 pm

9 Replies

6748 Views

Last post by breakwave922
Tue Jan 27, 2015 1:11 am
NEURON on GPUs?

Last post by ted « Thu Dec 18, 2014 10:56 am
Replies: 1
by catubc » Wed Dec 17, 2014 10:58 pm

1 Replies

5009 Views

Last post by ted
Thu Dec 18, 2014 10:56 am
Misalignment of Spike data

Last post by ted « Tue Dec 09, 2014 4:25 pm
Replies: 7
by guntu » Fri Nov 07, 2014 10:13 pm

7 Replies

6329 Views

Last post by ted
Tue Dec 09, 2014 4:25 pm
Installing NEURON on cluster

Last post by ted « Fri Aug 22, 2014 11:47 pm
Replies: 1
by catubc » Fri Aug 22, 2014 11:46 am

1 Replies

7072 Views

Last post by ted
Fri Aug 22, 2014 11:47 pm
Transition from serial simulation to parallel

Last post by hines « Tue Jul 29, 2014 4:11 pm
Replies: 5
by Sergey Aleksin » Wed May 28, 2014 6:27 pm

5 Replies

10251 Views

Last post by hines
Tue Jul 29, 2014 4:11 pm
Pause/Stop NEURON simulation to call run another program

Last post by catubc « Sat Jul 26, 2014 1:41 am
Replies: 5
by catubc » Mon Jul 21, 2014 10:41 pm

5 Replies

7456 Views

Last post by catubc
Sat Jul 26, 2014 1:41 am
VecStim in parallel environment

Last post by rth « Mon Jun 30, 2014 1:19 pm
Replies: 4
by rth » Mon Jun 23, 2014 12:26 am

4 Replies

7438 Views

Last post by rth
Mon Jun 30, 2014 1:19 pm
starting gui multisplit from code

Last post by ted « Tue Jun 10, 2014 10:38 am
Replies: 3
by oren » Sun Jun 08, 2014 10:48 am

3 Replies

5305 Views

Last post by ted
Tue Jun 10, 2014 10:38 am
Saving vector at each time step - not associated with cell

Last post by hines « Thu May 22, 2014 2:47 pm
Replies: 16
by sgratiy » Thu May 15, 2014 8:20 pm
1

2
16 Replies

13721 Views

Last post by hines
Thu May 22, 2014 2:47 pm

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