NEURON + Python

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Beginner needs help: Questions arise from tutorials

Last post by hines « Sat Jan 07, 2017 5:57 pm
Replies: 5
by magnolls » Thu Dec 29, 2016 10:42 pm

5 Replies

9142 Views

Last post by hines
Sat Jan 07, 2017 5:57 pm
Implementing Nernst-Planck Eletrodiffusion Eqn for Gap Junct

Last post by ted « Mon Dec 19, 2016 4:41 pm
Replies: 3
by Darshan » Tue Dec 13, 2016 10:39 am

3 Replies

8827 Views

Last post by ted
Mon Dec 19, 2016 4:41 pm
How to delete NetCon objects?

Last post by ted « Thu Nov 24, 2016 3:59 pm
Replies: 1
by Nin » Thu Nov 10, 2016 10:24 am

1 Replies

8564 Views

Last post by ted
Thu Nov 24, 2016 3:59 pm
Interviews graphing in Python

Last post by ted « Fri Sep 30, 2016 3:27 pm
Replies: 1
by JBall » Thu Sep 29, 2016 11:29 pm

1 Replies

8590 Views

Last post by ted
Fri Sep 30, 2016 3:27 pm
NetCon without point_process target

Last post by ted « Fri Sep 30, 2016 12:21 pm
Replies: 4
by Nin » Thu Sep 22, 2016 5:50 am

4 Replies

9196 Views

Last post by ted
Fri Sep 30, 2016 12:21 pm
Python object as argument of hoc function

Last post by Nin « Thu Sep 29, 2016 4:25 pm
Replies: 4
by Nin » Thu Sep 29, 2016 10:26 am

4 Replies

9638 Views

Last post by Nin
Thu Sep 29, 2016 4:25 pm
Using pc.broadcast with python

Last post by neuromau « Thu Aug 25, 2016 9:55 am
Replies: 2
by neuromau » Tue Aug 16, 2016 2:18 pm

2 Replies

9007 Views

Last post by neuromau
Thu Aug 25, 2016 9:55 am
Nice tutorials, one minor question

Last post by ted « Wed Aug 17, 2016 12:36 pm
Replies: 1
by neuromau » Tue Aug 16, 2016 12:53 pm

1 Replies

8570 Views

Last post by ted
Wed Aug 17, 2016 12:36 pm
Import mechanism with different default parameters

Last post by ted « Mon Jul 04, 2016 8:53 pm
Replies: 3
by gduffley » Thu Jun 30, 2016 6:45 pm

3 Replies

8906 Views

Last post by ted
Mon Jul 04, 2016 8:53 pm
Installing NEURON with Python using pip

Last post by eforzano « Sun Jun 19, 2016 3:10 pm
Replies: 1
by romain.caze » Tue Jun 30, 2015 4:44 am

1 Replies

9507 Views

Last post by eforzano
Sun Jun 19, 2016 3:10 pm
Workaround for problems loading mechs from nrnmech.dll

Last post by ted « Tue Jun 14, 2016 9:48 am

by ted » Tue Jun 14, 2016 9:48 am

0 Replies

12806 Views

Last post by ted
Tue Jun 14, 2016 9:48 am
import swc file for network simulation

Last post by bosse89 « Mon May 23, 2016 3:38 am
Replies: 2
by bosse89 » Fri May 20, 2016 5:24 am

2 Replies

7791 Views

Last post by bosse89
Mon May 23, 2016 3:38 am
Guidance on plotting cell's geometry in Python?

Last post by ramcdougal « Fri May 20, 2016 2:51 pm
Replies: 3
by dgalt » Fri May 20, 2016 12:02 pm

3 Replies

5890 Views

Last post by ramcdougal
Fri May 20, 2016 2:51 pm
AP propagates too slow

Last post by ted « Thu May 05, 2016 11:24 am
Replies: 7
by youngJose » Sat Apr 30, 2016 4:23 am

7 Replies

5059 Views

Last post by ted
Thu May 05, 2016 11:24 am
Export a subset of loaded morphology

Last post by ramcdougal « Tue Apr 26, 2016 3:41 pm
Replies: 3
by ahwillia » Tue Apr 26, 2016 12:35 am

3 Replies

4820 Views

Last post by ramcdougal
Tue Apr 26, 2016 3:41 pm
Problem with setdata on NEURON+Python

Last post by ted « Fri Apr 15, 2016 10:53 pm
Replies: 3
by vgoudar » Fri Apr 08, 2016 2:30 pm

3 Replies

4970 Views

Last post by ted
Fri Apr 15, 2016 10:53 pm
Help, NEURON equivalent of this Python Code?

Last post by JamesKyeh « Mon Mar 28, 2016 4:24 pm
Replies: 2
by JamesKyeh » Sat Mar 26, 2016 10:49 pm

2 Replies

4843 Views

Last post by JamesKyeh
Mon Mar 28, 2016 4:24 pm
Netcon source in NEURON+Python

Last post by vgoudar « Mon Mar 28, 2016 12:31 pm
Replies: 4
by vgoudar » Fri Mar 25, 2016 5:24 pm

4 Replies

5143 Views

Last post by vgoudar
Mon Mar 28, 2016 12:31 pm
Python package needs NEURON extensions - where to save

Last post by ted « Tue Mar 15, 2016 4:22 pm
Replies: 1
by calu » Tue Mar 15, 2016 2:29 pm

1 Replies

4405 Views

Last post by ted
Tue Mar 15, 2016 4:22 pm
NEURON, Python, ParallelNetManager, and BeforestepCallback

Last post by hines « Sun Jan 17, 2016 9:08 am
Replies: 6
by Grado » Thu Jan 07, 2016 3:56 pm

6 Replies

5659 Views

Last post by hines
Sun Jan 17, 2016 9:08 am
Introducing LFPy, a Python module for simulating LFPs

Last post by breakwave922 « Tue Dec 01, 2015 4:03 pm
Replies: 3
by ehagen » Thu Mar 22, 2012 9:41 am

3 Replies

5038 Views

Last post by breakwave922
Tue Dec 01, 2015 4:03 pm
Record the sum of multiple sources with h.Vector()

Last post by hines « Tue Oct 27, 2015 8:26 am
Replies: 4
by Grado » Mon Oct 19, 2015 10:35 pm

4 Replies

2402 Views

Last post by hines
Tue Oct 27, 2015 8:26 am
Problem with hclass in NEURON 7.4

Last post by apdavison « Wed Oct 14, 2015 4:42 am
Replies: 5
by apdavison » Thu Oct 01, 2015 11:10 am

5 Replies

1437 Views

Last post by apdavison
Wed Oct 14, 2015 4:42 am
how to install Python+NEURON in Windows

Last post by ted « Mon Oct 12, 2015 3:25 pm
Replies: 1
by breakwave922 » Thu Oct 08, 2015 12:40 am

1 Replies

1665 Views

Last post by ted
Mon Oct 12, 2015 3:25 pm
Patch to allow restore after recreating the geometry

Last post by jedlund « Wed Sep 30, 2015 7:38 pm
Replies: 4
by jedlund » Wed Sep 23, 2015 4:10 pm

4 Replies

1512 Views

Last post by jedlund
Wed Sep 30, 2015 7:38 pm
Monitoring injected current in a segment

Last post by hines « Thu Sep 17, 2015 9:38 am
Replies: 6
by dilawar » Tue May 05, 2015 8:05 am

6 Replies

1318 Views

Last post by hines
Thu Sep 17, 2015 9:38 am
Voltage output of cells in parallel python simulation

Last post by scienbox « Fri Aug 14, 2015 11:53 pm
Replies: 2
by scienbox » Thu Aug 13, 2015 7:05 pm

2 Replies

869 Views

Last post by scienbox
Fri Aug 14, 2015 11:53 pm
Repeated Step Pulses In Python

Last post by Dmandel « Fri Aug 07, 2015 10:44 am
Replies: 14
by Dmandel » Thu Jul 23, 2015 4:37 pm

14 Replies

1797 Views

Last post by Dmandel
Fri Aug 07, 2015 10:44 am
NEURON simulation in Python using real time stimulus

Last post by ikasid15 « Mon Jul 27, 2015 12:21 pm

by ikasid15 » Mon Jul 27, 2015 12:21 pm

0 Replies

3935 Views

Last post by ikasid15
Mon Jul 27, 2015 12:21 pm
Recording the m,h,n gating variables

Last post by ted « Sun Jul 26, 2015 1:24 pm
Replies: 1
by Dmandel » Fri Jul 24, 2015 4:08 pm

1 Replies

1797 Views

Last post by ted
Sun Jul 26, 2015 1:24 pm
[Win64][7.4][Canopy] "dlopen failed" and python crash

Last post by hines « Wed Jul 22, 2015 9:47 am
Replies: 11
by CYUlysses » Sat Jul 04, 2015 5:12 pm

11 Replies

2475 Views

Last post by hines
Wed Jul 22, 2015 9:47 am
setpointer in Python

Last post by ted « Thu Jul 09, 2015 4:15 pm
Replies: 15
by tfoutz99 » Wed Jul 01, 2009 6:48 pm
1

2
15 Replies

5829 Views

Last post by ted
Thu Jul 09, 2015 4:15 pm
problem with conductance unit in NEURON

Last post by ted « Tue Jun 23, 2015 12:14 pm
Replies: 1
by xin » Tue Jun 23, 2015 10:12 am

1 Replies

926 Views

Last post by ted
Tue Jun 23, 2015 12:14 pm
Accessing section type (or segment type) information

Last post by sgratiy « Thu Jun 18, 2015 3:37 pm

by sgratiy » Thu Jun 18, 2015 3:37 pm

0 Replies

547 Views

Last post by sgratiy
Thu Jun 18, 2015 3:37 pm
Importing neuron module into Python

Last post by R_Jarvis « Mon May 18, 2015 9:05 pm
Replies: 26
by roybens » Mon Dec 15, 2014 3:21 pm
1

2
26 Replies

8059 Views

Last post by R_Jarvis
Mon May 18, 2015 9:05 pm
Can't delete point process after accessing range variable

Last post by hines « Mon May 04, 2015 7:05 pm
Replies: 2
by lcampagn » Mon Apr 20, 2015 3:02 pm

2 Replies

809 Views

Last post by hines
Mon May 04, 2015 7:05 pm
Playing a vector into a linear mechanism from python

Last post by ted « Tue Apr 28, 2015 10:28 am
Replies: 4
by basjanzandt » Thu Apr 23, 2015 4:26 am

4 Replies

1788 Views

Last post by ted
Tue Apr 28, 2015 10:28 am
Error on loading the SWC file using neuron

Last post by ted « Sun Apr 26, 2015 5:25 pm
Replies: 2
by dilawar » Sat Apr 25, 2015 2:14 pm

2 Replies

1238 Views

Last post by ted
Sun Apr 26, 2015 5:25 pm
h.FInitializeHandler Crashing

Last post by bscoventry « Mon Mar 23, 2015 11:03 am
Replies: 5
by bscoventry » Tue Mar 17, 2015 11:17 am

5 Replies

1024 Views

Last post by bscoventry
Mon Mar 23, 2015 11:03 am
MWE for apparent bug discovered by PyNN format

Last post by Tom Close « Fri Mar 13, 2015 7:47 pm
Replies: 4
by Tom Close » Tue Mar 10, 2015 10:44 pm

4 Replies

1824 Views

Last post by Tom Close
Fri Mar 13, 2015 7:47 pm
SWC files

Last post by Kolorek « Tue Mar 10, 2015 5:37 pm
Replies: 33
by Kolorek » Mon Feb 02, 2015 5:26 am
1

2

3
33 Replies

9653 Views

Last post by Kolorek
Tue Mar 10, 2015 5:37 pm
substitute stadard init() precedure from Python

Last post by rth « Thu Feb 26, 2015 10:57 am
Replies: 2
by rth » Wed Feb 25, 2015 5:10 pm

2 Replies

1333 Views

Last post by rth
Thu Feb 26, 2015 10:57 am
Increase stacksize from python?

Last post by ramcdougal « Thu Feb 19, 2015 12:28 pm
Replies: 2
by aaronmil » Thu Feb 19, 2015 11:34 am

2 Replies

941 Views

Last post by ramcdougal
Thu Feb 19, 2015 12:28 pm
Compiling NEURON/Python

Last post by bscoventry « Mon Feb 16, 2015 4:00 pm
Replies: 4
by bscoventry » Sun Feb 15, 2015 9:51 pm

4 Replies

1196 Views

Last post by bscoventry
Mon Feb 16, 2015 4:00 pm
Driving synaptic event using vecStim

Last post by ted « Fri Jan 30, 2015 1:11 pm
Replies: 13
by mattions » Thu Dec 09, 2010 5:49 pm

13 Replies

6197 Views

Last post by ted
Fri Jan 30, 2015 1:11 pm
Strange behavior Updating HOC Vectors inside Python+mpi deff

Last post by R_Jarvis « Mon Jan 26, 2015 7:27 pm
Replies: 3
by R_Jarvis » Thu Jan 22, 2015 8:31 pm

3 Replies

1443 Views

Last post by R_Jarvis
Mon Jan 26, 2015 7:27 pm
how to save a segment list in a pkl file

Last post by hines « Sat Jan 24, 2015 8:05 am
Replies: 2
by tine » Wed Jan 21, 2015 12:43 pm

2 Replies

1223 Views

Last post by hines
Sat Jan 24, 2015 8:05 am
Running multiple simulations in one process

Last post by hines « Wed Jan 07, 2015 1:20 am
Replies: 19
by lcampagn » Tue Oct 28, 2014 2:17 pm
1

2
19 Replies

5807 Views

Last post by hines
Wed Jan 07, 2015 1:20 am
record from one cell of a matrix to a vector

Last post by oren « Thu Dec 25, 2014 5:39 am
Replies: 4
by oren » Mon Dec 22, 2014 9:38 am

4 Replies

1231 Views

Last post by oren
Thu Dec 25, 2014 5:39 am
What sets the sys.path for nrniv -python?

Last post by hines « Sun Dec 14, 2014 12:56 am
Replies: 5
by aaronmil » Thu Dec 11, 2014 4:44 pm

5 Replies

2241 Views

Last post by hines
Sun Dec 14, 2014 12:56 am

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