Search found 4 matches

by lempkas
Wed Oct 19, 2011 12:49 pm
Forum: NEURON + Python
Topic: Defining event times in the 'NetCon' object
Replies: 1
Views: 20116

Defining event times in the 'NetCon' object

I am trying to deliver a train of synaptic inputs to a cell at specified times using the event property of the 'NetCon' function and the 'Exp2Syn' mechanism. I have been able to do this in HOC but I'm having problems doing this in Python. An example of the typical structure of my HOC code is the fol...
by lempkas
Wed Oct 12, 2011 7:16 pm
Forum: NEURON + Python
Topic: Changing custom channel parameters through Python
Replies: 10
Views: 6328

Re: Changing custom channel parameters through Python

Thanks, Ted. It worked like a charm. The cell model that I have completely converted to Python seems to be working fine, but you're right and I am going to give the simulations with the original Hoc code another shot. If I can't figure out my problems with using 'NetCon', 'Exp2Syn', etc. from Python...
by lempkas
Wed Oct 12, 2011 1:39 am
Forum: NEURON + Python
Topic: Changing custom channel parameters through Python
Replies: 10
Views: 6328

Re: Changing custom channel parameters through Python

Thanks. As I mentioned in the previous post, I was able to define properties such as conductances just fine. I only got problems when I tried to define "vshift" and "vtraub" for the AXNODE75 channels and "cai0" for the Cacum channel. Sure, because that's not how to do it. What is the correct way to ...
by lempkas
Mon Oct 10, 2011 1:12 pm
Forum: NEURON + Python
Topic: Changing custom channel parameters through Python
Replies: 10
Views: 6328

Re: Changing custom channel parameters through Python

I have been working on converting a single cell model with detailed anatomy and biophysics from Hoc to Python. I am currently having problems with custom ion channel mechanisms. I am able to insert the mechanisms, but I am having problems defining some of the specific parameters. sec.insert(‘channel...