eion.c File Reference

#include <../../nrnconf.h>
#include <stdlib.h>
#include "section.h"
#include "neuron.h"
#include "membfunc.h"
#include "parse.h"
#include "membdef.h"

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Defines
#define	global_conci(type)   ion_global_map[type][0]
#define	global_conco(type)   ion_global_map[type][1]
#define	global_charge(type)   ion_global_map[type][2]
#define	VAL_SENTINAL   -10000.
#define	FARADAY   96485.309
#define	ktf   (1000.*8.3134*(celsius + 273.15)/FARADAY)
Functions
double	chkarg ()
Section *	nrn_noerr_access ()
static	ion_cur ()
static	ion_init ()
double	nrn_nernst ()
double	nrn_ghk ()
int	nrn_is_ion (int type)
double	nrn_ion_charge (Symbol *sym)
	ion_register ()
	ion_charge ()
	ion_reg (char *name, double valence)
double	nrn_nernst (double ci, double co, double z)
	nrn_wrote_conc (Symbol *sym, double *pe, int it)
int	nernst ()
double	nrn_ghk (double v, double ci, double co, double z)
int	ghk ()
Variables
Symlist *	hoc_symlist
Symlist *	hoc_built_in_symlist
Symlist *	hoc_top_level_symlist

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Define Documentation

#define FARADAY   96485.309

Referenced by nrn_ghk().

#define global_charge

(

type

)

ion_global_map[type][2]

Referenced by ion_charge(), ion_reg(), nernst(), and nrn_ion_charge().

#define global_conci

(

type

)

ion_global_map[type][0]

Referenced by ion_reg().

#define global_conco

(

type

)

ion_global_map[type][1]

Referenced by ion_reg().

#define ktf   (1000.*8.3134*(celsius + 273.15)/FARADAY)

Referenced by nernst(), nrn_ghk(), and nrn_nernst().

#define VAL_SENTINAL   -10000.

Referenced by ion_reg().

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Function Documentation

double chkarg

(

)

int ghk

(

)

References getarg(), nrn_ghk(), and ret.

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ion_charge

(

)

References Memb_func::alloc, gargstr(), global_charge, hoc_execerror(), hoc_lookup(), memb_func, ret, s, Symbol::subtype, and Symbol::type.

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static ion_cur

(

)

Referenced by ion_reg().

static ion_init

(

)

Referenced by ion_reg().

ion_reg	(	char *	name,
		double	valence
	)

References _AMBIGUOUS, Memb_func::alloc, buf, DEF_cai, DEF_cao, DEF_ioni, DEF_iono, DEF_ki, DEF_ko, DEF_nai, DEF_nao, e, emalloc, erealloc, fprintf(), global_charge, global_conci, global_conco, hoc_lookup(), hoc_register_var(), hoc_symbol_limits(), hoc_symbol_units(), i, ion_cur(), ion_init(), memb_func, DoubScal::name, Symbol::name, nrn_exit(), nrn_get_mechtype(), nrn_writes_conc(), DoubScal::pdoub, Symbol::ppsym, register_mech(), s, Sprintf, Symbol::subtype, Symbol::type, Symbol::u, and VAL_SENTINAL.

Referenced by _hh_reg_(), KSChan::build(), ion_register(), KSChan::setligand(), and KSChan::settype().

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ion_register

(

)

References Memb_func::alloc, buf, gargstr(), getarg(), hoc_lookup(), ion_reg(), memb_func, name, ret, s, Symbol::subtype, and Symbol::type.

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int nernst

(

)

References chk_access(), chkarg(), e, exp, gargstr(), getarg(), global_charge, hoc_execerror(), hoc_is_str_arg(), hoc_lookup(), ifarg(), ktf, memb_func, nrn_nernst(), nrn_rangepointer(), Symbol::ppsym, ret, Symbol::rng, s, sec, Memb_func::sym, Symbol::u, and x.

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double nrn_ghk	(	double	v,
		double	ci,
		double	co,
		double	z
	)

References FARADAY, and ktf.

double nrn_ghk

(

)

Referenced by KSPPIvghk::cur(), KSIvghk::cur(), ghk(), KSPPIvghk::jacob(), and KSIvghk::jacob().

double nrn_ion_charge

(

Symbol *

sym

)

References global_charge, and Symbol::subtype.

Referenced by nrn_wrote_conc(), and KSChan::setcond().

int nrn_is_ion

(

int

type

)

References memb_func.

Referenced by nrn_writes_conc().

double nrn_nernst	(	double	ci,
		double	co,
		double	z
	)

References ktf.

double nrn_nernst

(

)

Referenced by nernst(), and nrn_wrote_conc().

Section* nrn_noerr_access

(

)

References ForAllSections, Section::prop, and Section::refcount.

nrn_wrote_conc	(	Symbol*	sym,
		double*	pe,
		int	it
	)

References nrn_ion_charge(), and nrn_nernst().

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Variable Documentation

Symlist * hoc_built_in_symlist

Symlist* hoc_symlist

Symlist * hoc_top_level_symlist