nrnpy_nrn.cpp File Reference

#include <nrnpython.h>
#include <structmember.h>
#include <InterViews/resource.h>
#include <nrnoc2iv.h>
#include <membfunc.h>
#include <parse.h>
#include "nrnpy_nrn_2.h"

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Classes
struct	NPySecObj
struct	NPySegObj
struct	NPyMechObj
struct	NPyRVItr
struct	NPyRangeVar
Functions
void	sec_free (hoc_Item *)
double *	nrnpy_rangepointer (Section *, Symbol *, double, int *)
Section *	nrnpy_newsection (NPySecObj *)
void	simpleconnectsection ()
void	nrn_change_nseg (Section *, int)
double	section_length (Section *)
double	nrn_ra (Section *)
int	can_change_morph (Section *)
void	nrn_diam_change (Section *)
void	nrn_length_change (Section *, double)
void	mech_insert1 (Section *, int)
PyObject *	nrn_hocobj_ptr (double *)
PyObject *	nrnpy_forall (PyObject *self, PyObject *args)
Object *	nrnpy_po2ho (PyObject *)
Object *	nrnpy_pyobject_in_obj (PyObject *)
int	nrnpy_ho_eq_po (Object *, PyObject *)
PyObject *	nrnpy_hoc2pyobject (Object *)
PyObject *	nrnpy_ho2po (Object *)
PyObject *	NPySecObj_new (PyTypeObject *type, PyObject *args, PyObject *kwds)
PyObject *	nrnpy_newsecobj (PyObject *self, PyObject *args, PyObject *kwds)
PyObject *	nrnpy_pushsec (PyObject *sec)
double **	nrnpy_setpointer_helper (PyObject *name, PyObject *mech)
PyObject *	nrnpy_cas (PyObject *self, PyObject *args)
myPyMODINIT_FUNC	nrnpy_nrn (void)
Variables
Symlist *	hoc_built_in_symlist
short *	nrn_is_artificial_
cTemplate **	nrn_pnt_template_
int	diam_changed
Symbol *	nrnpy_pyobj_sym_
void(*	nrnpy_reg_mech_p_ )(int)
void(*	nrnpy_o2loc_p_ )(Object *, Section **, double *)
char *(*	nrnpy_pysec_name_p_ )(Section *)
Object *(*	nrnpy_pysec_cell_p_ )(Section *)
int(*	nrnpy_pysec_cell_equals_p_ )(Section *, Object *)

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Function Documentation

int can_change_morph

(

Section *

)

void mech_insert1	(	Section *	,
		int
	)

PyObject* NPySecObj_new	(	PyTypeObject *	type,
		PyObject *	args,
		PyObject *	kwds
	)

Referenced by nrnpy_newsecobj().

void nrn_change_nseg	(	Section *	,
		int
	)

void nrn_diam_change

(

Section *

)

PyObject* nrn_hocobj_ptr

(

double *

)

References PyHocObject::px_, PyHocObject::type_, and PyHocObject::u.

void nrn_length_change	(	Section *	,
		double
	)

double nrn_ra

(

Section *

)

References Prop::dparam, Section::prop, and Datum::val.

Referenced by nrn_area_ri(), and psection().

PyObject* nrnpy_cas	(	PyObject *	self,
		PyObject *	args
	)

References Datum::_pvoid, assert, NPySecObj::cell_, chk_access(), Prop::dparam, NPySecObj::name_, Section::prop, PROP_PY_INDEX, NPySecObj::sec_, and section_ref().

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PyObject* nrnpy_forall	(	PyObject *	self,
		PyObject *	args
	)

References PyHocObject::iteritem_, section_list, and PyHocObject::type_.

PyObject* nrnpy_ho2po

(

Object *

)

int nrnpy_ho_eq_po	(	Object *	ho,
		PyObject *	po
	)

References nrnpy_pyobj_sym_.

PyObject* nrnpy_hoc2pyobject

(

Object *

)

PyObject* nrnpy_newsecobj	(	PyObject *	self,
		PyObject *	args,
		PyObject *	kwds
	)

References NPySecObj_new().

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Section* nrnpy_newsection

(

NPySecObj *

)

myPyMODINIT_FUNC nrnpy_nrn

(

void

)

References assert, i, nrnpy_o2loc_p_, nrnpy_pysec_cell_equals_p_, nrnpy_pysec_cell_p_, nrnpy_pysec_name_p_, and nrnpy_reg_mech_p_.

Referenced by nrnpy_hoc().

Object* nrnpy_po2ho

(

PyObject *

)

PyObject* nrnpy_pushsec

(

PyObject *

sec

)

References nrn_pushsec().

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Object* nrnpy_pyobject_in_obj

(

PyObject *

)

References hoc_new_object(), hoc_obj_ref(), nrnpy_pyobj_sym_, on, Py2Nrn::po_, and Py2Nrn::type_.

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double* nrnpy_rangepointer	(	Section *	,
		Symbol *	,
		double	,
		int *
	)

double** nrnpy_setpointer_helper	(	PyObject *	name,
		PyObject *	mech
	)

References Prop::dparam, NrnProperty::find(), memb_func, Symbol::name, NRNPOINTER, NPyMechObj::prop_, NrnProperty::prop_index(), Datum::pval, Symbol::subtype, Memb_func::sym, Symbol::type, and Prop::type.

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void sec_free

(

hoc_Item *

)

References assert, Prop::dparam, hocSEC, hoc_Item::itemtype, nrn_node_destruct1(), Datum::obj, Section::parentnode, Section::parentsec, prop, Section::prop, prop_free(), sec, section_unlink(), and section_unref().

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double section_length

(

Section *

)

References e, and x.

Referenced by node_dist(), nrn_area_ri(), and psection().

void simpleconnectsection

(

)

Referenced by debugzz().

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Variable Documentation

int diam_changed

Referenced by MultiSplitControl::exchange_setup(), fadvance(), fcurrent(), morph_alloc(), nrn_area_ri(), nrn_lhs(), nrn_matrix_node_free(), nrn_rhs(), nrn_shape_update(), nrn_threads_create(), recalc_diam(), and verify_structure().

Symlist* hoc_built_in_symlist

short* nrn_is_artificial_

Referenced by add_nrn_artcell(), create_point_process(), get_loc_point_process(), hoc_last_init(), MechanismType::is_artificial(), loc_point_process(), nrn_finitialize(), nrn_is_artificial(), nrn_loc_point_process(), nrn_vecsim_add(), SaveState::read(), register_mech(), SaveState::restore(), SaveState::save(), SaveState::SaveState(), and SaveState::write().

cTemplate** nrn_pnt_template_

Referenced by hoc_last_init(), nrn_finitialize(), and register_mech().

void(* nrnpy_o2loc_p_)(Object *, Section **, double *)

Referenced by loc_point_process(), and nrnpy_nrn().

Symbol* nrnpy_pyobj_sym_

int(* nrnpy_pysec_cell_equals_p_)(Section *, Object *)

Referenced by nrn_sec2cell_equals(), and nrnpy_nrn().

Object*(* nrnpy_pysec_cell_p_)(Section *)

Referenced by nrn_sec2cell(), and nrnpy_nrn().

char*(* nrnpy_pysec_name_p_)(Section *)

Referenced by nrnpy_nrn(), and secname().

void(* nrnpy_reg_mech_p_)(int)

Referenced by nrnpy_nrn(), point_reg_helper(), and register_mech().