Gap junction support - parallel simulation?
Moderator: tom_morse
Gap junction support - parallel simulation?
I was hoping to clarify - does the current support for gap junctions in NetPyNE (ie tut_gap.py) allow simulation in parallel (with MPI)?
Re: Gap junction support - parallel simulation?
Yes, it did originally, but I just tested it and seems some change introduced in a later version has broken mpi support -- I will post a message here once I fix it.
thanks for your message
thanks for your message
Re: Gap junction support - parallel simulation?
Thanks for the reply. Good to know, I'll keep listening here for the update.
Re: Gap junction support - parallel simulation?
I fixed the bug that was preventing gap junctions to work with multiple cores. It will be released in the next version but you can try it now using the 'development' version of NetPyNE -- see instructions here: http://neurosimlab.org/netpyne/install. ... nt-version
let me know if it works or you still have issues
thanks
let me know if it works or you still have issues
thanks