Periodically saving results during simulation
Posted: Wed Jul 31, 2019 1:29 pm
Hello,
I'd like to be able to save the spikes and and recorded intracellular traces of the neurons in a large scale network simulation every few thousand ms of simulation time, and I am wondering if anyone has implemented something similar, or has thoughts on the subject. My initial idea was to implement this as an event handler via the cvode.event mechanism, but then the compute time measurement will be affected while data is being saved, and possibly timeouts will occur. Would it be better to set tstop to the next time when data should be saved? Any suggestions are appreciated.
-Ivan
I'd like to be able to save the spikes and and recorded intracellular traces of the neurons in a large scale network simulation every few thousand ms of simulation time, and I am wondering if anyone has implemented something similar, or has thoughts on the subject. My initial idea was to implement this as an event handler via the cvode.event mechanism, but then the compute time measurement will be affected while data is being saved, and possibly timeouts will occur. Would it be better to set tstop to the next time when data should be saved? Any suggestions are appreciated.
-Ivan