Search found 8 matches

by joe1234
Fri May 22, 2009 10:05 am
Forum: OS X
Topic: Problems to compile NEURON on Mac Xgrid
Replies: 5
Views: 5564

Re: Problems to compile NEURON on Mac Xgrid

Thanks Michael for your efforts with this. I was just told by the xgrid person here that he's changed the system so that there's a central fileserver where NEURON can be installed, solving the problems we've had. So I won't bother you again! Here is the Stanford implementation of the xgrid and we're...
by joe1234
Fri May 22, 2009 6:32 am
Forum: OS X
Topic: Problems to compile NEURON on Mac Xgrid
Replies: 5
Views: 5564

Re: Problems to compile NEURON on Mac Xgrid

Thanks very much for your reply Michael. Unfortunately the grid is down so I haven't been able to attempt your suggestion, but I will try it as soon as it's running again: ./configure --prefix=$IDIR/nrn --without-x --with-paranrn But, to answer your question with a question. Are you sure there is no...
by joe1234
Wed May 20, 2009 9:43 am
Forum: OS X
Topic: Problems to compile NEURON on Mac Xgrid
Replies: 5
Views: 5564

Problems to compile NEURON on Mac Xgrid

Hi, We are trying to run NEURON 7.0 on a local network of seven eight-core Macs running MacOSX (10.4 &.5). The grid is controlled by apple's Xgrid software which creates a directory on a local mac for each job (with user name nobody), assigning random names. Unfortunately, it isn't possible to h...
by joe1234
Sun Nov 09, 2008 1:52 pm
Forum: Other questions
Topic: Poisson distributed synaptic input
Replies: 5
Views: 16052

Re: Poisson distributed synaptic input

A modified version of NetStim giving different orders of gamma distributions is available here:
http://senselab.med.yale.edu/simtooldb/ ... ool=116230
Joe
by joe1234
Mon Jan 07, 2008 3:47 am
Forum: Adding new mechanisms and functions to NEURON
Topic: NMODL mechanism using two USEION statements
Replies: 2
Views: 2722

Thanks for your reply Raj. I've finally, after two weeks of bug hunting, found the fault elsewhere in the model. Now it works beautifully!
So nothing's wrong with the code I gave, it seems.
Thanks again,

Joe
by joe1234
Fri Jan 04, 2008 4:39 pm
Forum: Adding new mechanisms and functions to NEURON
Topic: NMODL mechanism using two USEION statements
Replies: 2
Views: 2722

NMODL mechanism using two USEION statements

I'm translating a GENESIS model into NEURON and the 10 NMODL mechanisms all work the same in my nrn model as in the genesis one, with one exception. The trouble-maker is an Sk channel, a calcium-dependent potassium channel, reading calcium concentration from a 200 nM shell below the cell membrane. T...
by joe1234
Mon Nov 19, 2007 11:25 am
Forum: The GUI
Topic: Is it possible to set the title of a Graph window?
Replies: 3
Views: 4514

Thanks a lot Ted, that works beautifully! (I'm working on Windows XP)
BTW, the programmer's ref says it doesn't work under MS Windows (http://www.neuron.yale.edu/neuron/stati ... x.html#map)

Joe
by joe1234
Fri Nov 16, 2007 10:35 am
Forum: The GUI
Topic: Is it possible to set the title of a Graph window?
Replies: 3
Views: 4514

Is it possible to set the title of a Graph window?

Hi, I'm making graphs in the NEURON GUI (programmatically, via hoc) of the parameters of my home-made NMODL schemes. I would like to be able to change the window titles from the default such as "Graph[0] x-50:550 ..." to a title of my own. I haven't found anything through heavy searching o...