Hi,
indeed it runs without memory problems if I don't use thE workaround, but crashes when I do use it.
I am running just one simulation, CPU is only 3% used but memory fully used after some minutes.
I will send you the files, thanks! =)
Search found 6 matches
- Thu Apr 19, 2018 11:05 am
- Forum: The GUI
- Topic: gui not accessible and graphs not updating while running simulations from Python
- Replies: 8
- Views: 16035
- Thu Apr 19, 2018 7:12 am
- Forum: The GUI
- Topic: gui not accessible and graphs not updating while running simulations from Python
- Replies: 8
- Views: 16035
Re: gui not accessible and graphs not updating while running simulations from Python
Dear ramcdougal, indeed that stops the problem of the neurongui being stuck, but at the same time creates a problem with memory management as it continuously stores data in the memory until 100% is used and eventually python crashes (I have 64 GB of RAM). Another symptom is that although the gui is ...
- Tue Apr 17, 2018 11:04 am
- Forum: The GUI
- Topic: gui not accessible and graphs not updating while running simulations from Python
- Replies: 8
- Views: 16035
Re: gui not accessible and graphs not updating while running simulations from Python
It is not Spyder-specific. From the python prompt the behavior is the same. OS: Windows 10 Pro for workstations, 64 bits Neuron: VERSION 7.5 master (6b4c19f) 2017-09-25 I was wondering if it´s maybe a normal python behavior (first time I program in python), and this can be solved by using different ...
- Tue Apr 17, 2018 9:42 am
- Forum: The GUI
- Topic: gui not accessible and graphs not updating while running simulations from Python
- Replies: 8
- Views: 16035
gui not accessible and graphs not updating while running simulations from Python
Hi, I am migrating from hoc based control of Neuron, to a Python + hoc system. I am now able to run the simulations as I wanted and record the results. I am using Spyder for writing and to execute the commands. I initiate the model using: from neuron import h, gui import numpy import matplotlib.pypl...
- Tue Oct 28, 2014 12:52 pm
- Forum: Getting started
- Topic: Updating procedures
- Replies: 2
- Views: 2053
Re: Updating procedures
Thanks Ted, that worked perfectly.
- Tue Oct 28, 2014 6:55 am
- Forum: Getting started
- Topic: Updating procedures
- Replies: 2
- Views: 2053
Updating procedures
Dear Ted, Probably this question came up before but I couldn´t find it. Being a total newbie, I created a GUI (using xpanel) that suited my particular needs for exploratory experiments. I start neuron by loading a set of .hoc files that contain procedures for topology, biophysics, panels, point proc...