Mapping of hoc toploogy and 3D morphology
Posted: Tue Jun 06, 2017 3:10 pm
I recently exported a .asc file and created a hoc template. Everything works well, thanks to this forum and the well documented procedures on how to use import3D.
I am recording transmembrane currents from certain compartments/segments. I have the morphology plotted using the trees toolbox.
I need to create a map/figure which says that for example, currents recorded from 'nth' dendritic compartment corresponds to this dendrite (or point) in the 3D morphology plot. How do I map each compartment/segment in the hoc file to a particular point in the 3D morphology ?
Thanks in advance.
I am recording transmembrane currents from certain compartments/segments. I have the morphology plotted using the trees toolbox.
I need to create a map/figure which says that for example, currents recorded from 'nth' dendritic compartment corresponds to this dendrite (or point) in the 3D morphology plot. How do I map each compartment/segment in the hoc file to a particular point in the 3D morphology ?
Thanks in advance.