Visualizing Connection Between Cell in a Network

Using the graphical user interface to build and exercise models. Includes customizing the GUI by writing a little bit of hoc.
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SpecialK
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Joined: Fri May 26, 2017 5:10 pm

Visualizing Connection Between Cell in a Network

Post by SpecialK » Thu Jul 06, 2017 10:36 am

I am still getting familiar with Neuron so I am not aware of all of its functions yet. I am trying to create a network where all the cells are arranged in a 2D grid. I can verify I have done this properly through the shape plot on the GUI. I was wondering if I could also see the connections between the cells, this would help me verify the connection were done correctly and also provide a nice visual aid for presentations. Is there any way to get the connections to show up on the shape plot? I am using the netCon object to connect cells and synapses. Thanks very much!

ted
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Re: Visualizing Connection Between Cell in a Network

Post by ted » Thu Jul 06, 2017 10:55 am

That would be nice, wouldn't it. Unfortunately NEURON doesn't have such a feature at this time.

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