I want to monitor the impedance of the model neuron while simulation is running, let's say every 50 ms. So I made a script that advances 50 ms, pauses the simulations and recalculates an impedance object that is inserted. However, starting from Neuron 7.0 I found out that I can't do this any longer, as something (I don't know what yet) changes when the impedance is computed and the rest of the simulation is completely different!
I have a model of slow oscillation bursting. It is only one section, one segment, and has an impedance object inserted. If I do:
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** run for 2000 ms imp.compute(0) ** run for 2000 ms
But the most important aspect of this problem is that it didn't happen with Neuron 6.2. What has changed since with the impedance class? I can still keep working with neuron 6.2 for a while, but I think this is something that should be addressed in some way... or not?
EDIT: You can reproduce it in a section with HH mechanism, and a IClamp that makes it fire continuously.