Code: Select all
begintemplate tpTCN
external newseed, grDur, stimulatortime
public soma,vcell,gnoise,electrode,stimulator
create soma
objref vcell,gnoise,electrode,stimulator
proc init() {
access soma
soma {
nseg = 1
diam = 76.58
L = 100
cm = 1
insert hh2
ena = 50
ek = -100
vtraub_hh2 = -52
gnabar_hh2 = 0.01
gkbar_hh2 = 0.01
insert itGHK
cai = 2.4e-4
cao = 2
eca = 120
shift_itGHK = -1
gcabar_itGHK = 0.0002
qm_itGHK = 2.5
qh_itGHK = 2.5
pcabar_itGHK = 8e-5
insert cad
depth_cad = 0.1
kt_cad = 0
kd_cad = 1e-4
taur_cad = 5
cainf_cad = 2.4e-4
insert pas
g_pas = 3.79e-5
e_pas = -76.5
cm = 0.88
Ra = 173
gnoise = new Gfluct(0.5)
gnoise.g_e0 = 0.0711
gnoise.std_e = 0.005
gnoise.g_i0 = 0.1
gnoise.std_i = 0.02
gnoise.tau_e = 3
gnoise.tau_i = 10
gnoise.E_e = 0
gnoise.E_i = -75
gnoise.new_seed(newseed())
electrode = new PointProcessManager(0)
electrode.pp=new IClamp(0)
electrode.pp.del=0
electrode.pp.dur=grDur
electrode.pp.amp=0
}
vcell = new Vector()
vcell.record(&soma.v(0.5))
stimulator=new VectorPlay(1)
stimulator.vy = new Vector(grDur+1)
stimulator.vx = stimulatortime
stimulator.vy.play(&electrode.pp.amp, stimulator.vx)
}
endtemplate tpTCN
Code: Select all
rowsTCN=30
colsTCN=rowsTCN
slabsTCN=2
objref TCN[colsTCN][rowsTCN][slabsTCN]
for col=0, colsTCN-1 for row=0, rowsTCN-1 for slab=0, slabsTCN-1 {
TCN[col][row][slab] = new tpTCN()
TCN[col][row][slab].gnoise.g_e0 = .05
print "created TCN[",col,"][",row,"][",slab,"]"
}
Is this normal?
Is there a way to speed this up?