I am trying to define biophysical properties for simulation. I tried doing it with two methods.
1) I imported morphology, set parameters using GUI. Then to simulate I tried to import it's hoc file to python using the instruction https://www.neuron.yale.edu/neuron/stat ... essing-hoc, but it shows an error.
2) I also imported the morphology file directly to python environment successfully using the code from viewtopic.php?t=3874 and then tried to add biophysical parameters. But wasn't successful in adding the desired values. I looked up in the examples from https://neuron.yale.edu/neuron/static/c ... amples.zip but to no avail.AttributeError: module 'neuron' has no attribute '_has_rxd'
0 /usr/local/nrn/x86_64/bin/nrniv: can't open ca3fin.hoc
I am not able to link the loaded cell data and function/methods to assign values.
It would be great if anyone could shed some light or provide a link to some project/code which easily explains.
Thanks for your time.