NEURON installation and configuration

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OS X
Topics: 139

139 Topics

838 Posts

Last post Re: nrngui not opening main m…
by hines View the latest post
Sat Sep 17, 2022 3:26 pm
MSWin
Topics: 134

134 Topics

763 Posts

Last post Re: bash:........bad interept…
by cassiehu View the latest post
Wed Sep 21, 2022 6:34 am
UNIX/Linux
Topics: 190

190 Topics

850 Posts

Last post Re: Unable to run nrniv -pyth…
by silvan View the latest post
Tue Nov 15, 2022 12:37 pm

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If you can't compile mod files . . .

Last post by LN_philippe « Fri Apr 16, 2021 2:06 pm
Replies: 26
by ted » Tue Aug 18, 2009 12:25 am
1

2
26 Replies

40110 Views

Last post by LN_philippe
Fri Apr 16, 2021 2:06 pm
[SOLVED] Unable to run nrniv -python with NEURON 8.0.0 installed via pip

Last post by silvan « Tue Nov 15, 2022 12:37 pm
Replies: 6
by silvan » Mon Nov 14, 2022 1:26 pm

6 Replies

254 Views

Last post by silvan
Tue Nov 15, 2022 12:37 pm
bash:........bad interepter. no such file or directory

Last post by cassiehu « Wed Sep 21, 2022 6:34 am
Replies: 12
by cassiehu » Sat Sep 17, 2022 9:20 am

12 Replies

782 Views

Last post by cassiehu
Wed Sep 21, 2022 6:34 am
nrngui not opening main menu GUI on startup on M1 Mac

Last post by hines « Sat Sep 17, 2022 3:26 pm
Replies: 13
by was2be » Sun Nov 07, 2021 8:21 pm

13 Replies

1594 Views

Last post by hines
Sat Sep 17, 2022 3:26 pm
Error after install NEURON 8 using rxd

Last post by neuron121! « Wed Jul 27, 2022 12:34 pm
Replies: 4
by RBJ » Wed Feb 09, 2022 8:03 am

4 Replies

770 Views

Last post by neuron121!
Wed Jul 27, 2022 12:34 pm
Can't Load .mod files in Python Script

Last post by ted « Wed Jul 20, 2022 6:28 pm
Replies: 4
by Liz_Stan_88 » Wed Jul 20, 2022 9:27 am

4 Replies

386 Views

Last post by ted
Wed Jul 20, 2022 6:28 pm
Insert Mechanisms in Matlab

Last post by ted « Mon Jul 18, 2022 4:59 pm
Replies: 1
by chrysatbr » Mon Jul 18, 2022 11:21 am

1 Replies

216 Views

Last post by ted
Mon Jul 18, 2022 4:59 pm
Bad xdarwin link in troubleshooting tip

Last post by ted « Tue Jun 07, 2022 2:28 pm
Replies: 1
by fietkiewicz » Tue Jun 07, 2022 12:11 pm

1 Replies

305 Views

Last post by ted
Tue Jun 07, 2022 2:28 pm
NEURON 7.6.7 - Permission denied. Python not available.

Last post by AnaLuis « Fri May 20, 2022 9:58 am
Replies: 21
by AnaLuis » Mon May 16, 2022 12:16 pm
1

2
21 Replies

2689 Views

Last post by AnaLuis
Fri May 20, 2022 9:58 am
MacOS 12.3; Application "Terminal" can't be opened. -1703

Last post by hines « Sat Mar 19, 2022 1:04 pm
Replies: 4
by was2be » Tue Mar 15, 2022 10:47 am

4 Replies

938 Views

Last post by hines
Sat Mar 19, 2022 1:04 pm
PyCharm "ModuleNotFoundError: No module named 'neuron'"

Last post by RBJ « Thu Feb 10, 2022 6:57 am
Replies: 1
by sangwonc » Mon Jan 24, 2022 2:43 am

1 Replies

1163 Views

Last post by RBJ
Thu Feb 10, 2022 6:57 am
Intel MKL Fatal error when executing HOC file

Last post by hines « Wed Nov 17, 2021 8:12 pm
Replies: 7
by sangwonc » Mon Nov 08, 2021 11:10 pm

7 Replies

10830 Views

Last post by hines
Wed Nov 17, 2021 8:12 pm
Unable to build NEURON v8 with CoreNeuron and GPU support

Last post by deka10 « Sat Jun 05, 2021 9:36 am
Replies: 4
by deka10 » Tue Jun 01, 2021 1:20 pm

4 Replies

2032 Views

Last post by deka10
Sat Jun 05, 2021 9:36 am
Gui Freezing

Last post by ted « Fri Apr 02, 2021 12:10 pm
Replies: 5
by LauraD » Wed Oct 21, 2020 8:32 pm

5 Replies

1773 Views

Last post by ted
Fri Apr 02, 2021 12:10 pm
NEURON on ARM M1, Big Sur and Rosetta

Last post by watersun « Thu Apr 01, 2021 4:28 pm
Replies: 4
by watersun » Tue Dec 01, 2020 8:32 am

4 Replies

2304 Views

Last post by watersun
Thu Apr 01, 2021 4:28 pm
OpenMP based parallelism in NEURON

Last post by pkumbhar « Wed Feb 17, 2021 10:37 am
Replies: 1
by itaru » Fri May 15, 2020 1:05 am

1 Replies

6637 Views

Last post by pkumbhar
Wed Feb 17, 2021 10:37 am
Issues with Anaconda install

Last post by Leam « Tue Feb 09, 2021 9:01 am
Replies: 2
by Leam » Mon Jan 25, 2021 12:19 pm

2 Replies

2463 Views

Last post by Leam
Tue Feb 09, 2021 9:01 am
Compiling mod files

Last post by ted « Wed Dec 23, 2020 1:36 pm
Replies: 1
by vreddy20 » Mon Dec 21, 2020 4:38 pm

1 Replies

1153 Views

Last post by ted
Wed Dec 23, 2020 1:36 pm
Unable to find Import3d_Neurolucida3

Last post by NickHananeia « Fri Dec 11, 2020 2:48 pm
Replies: 4
by NickHananeia » Wed Dec 09, 2020 11:51 am

4 Replies

1554 Views

Last post by NickHananeia
Fri Dec 11, 2020 2:48 pm
Compiling script fails with newer NEURON versions due to $N

Last post by Mohamed_Hisham « Sun Nov 15, 2020 2:34 pm
Replies: 6
by MBeining » Sun May 26, 2019 5:26 am

6 Replies

3850 Views

Last post by Mohamed_Hisham
Sun Nov 15, 2020 2:34 pm
Program editors for OS X

Last post by SurG « Thu Nov 12, 2020 5:58 pm
Replies: 8
by ted » Thu May 03, 2007 6:34 pm

8 Replies

11769 Views

Last post by SurG
Thu Nov 12, 2020 5:58 pm
Installing on Ubuntu 20.04 (GUI not working)

Last post by hines « Thu Oct 22, 2020 5:25 pm
Replies: 7
by sohaib786 » Sun Oct 04, 2020 8:22 am

7 Replies

3260 Views

Last post by hines
Thu Oct 22, 2020 5:25 pm
Configure fonts, etc in GUI

Last post by mattnolan « Thu Oct 01, 2020 4:12 am
Replies: 2
by mattnolan » Wed Sep 30, 2020 4:25 pm

2 Replies

1246 Views

Last post by mattnolan
Thu Oct 01, 2020 4:12 am
DLL LOAD FAILED importing python packages from anaconda into neuron

Last post by ted « Mon Aug 17, 2020 11:14 am
Replies: 1
by aliaped » Thu Aug 13, 2020 10:32 am

1 Replies

2045 Views

Last post by ted
Mon Aug 17, 2020 11:14 am
DLL load failed in Windows10

Last post by kazutaka « Mon Aug 17, 2020 8:03 am
Replies: 4
by kazutaka » Sun Aug 09, 2020 8:52 pm

4 Replies

2093 Views

Last post by kazutaka
Mon Aug 17, 2020 8:03 am
.mod files compilation issues

Last post by mmushtaq « Mon Jun 08, 2020 4:25 am
Replies: 4
by mmushtaq » Thu Jun 04, 2020 8:37 am

4 Replies

5262 Views

Last post by mmushtaq
Mon Jun 08, 2020 4:25 am
Windows 10, Permission Denied

Last post by ramcdougal « Sun Jun 07, 2020 5:41 pm
Replies: 1
by n74jw » Fri Jun 05, 2020 5:57 pm

1 Replies

3906 Views

Last post by ramcdougal
Sun Jun 07, 2020 5:41 pm
Open MPI error with h.nrnmpi_init(): mca_base_component_repository_open: unable to open mca_patcher_overwrite

Last post by hines « Wed Jun 03, 2020 9:08 am
Replies: 7
by tony-azevedo » Sat May 30, 2020 10:04 am

7 Replies

5208 Views

Last post by hines
Wed Jun 03, 2020 9:08 am
Syntax Warning

Last post by ramcdougal « Mon Jun 01, 2020 1:44 pm
Replies: 1
by ryang » Fri May 29, 2020 2:18 pm

1 Replies

2144 Views

Last post by ramcdougal
Mon Jun 01, 2020 1:44 pm
Running hoc files from sublime text 3

Last post by ryang « Fri May 29, 2020 1:50 pm
Replies: 1
by ryang » Thu May 28, 2020 5:05 pm

1 Replies

1264 Views

Last post by ryang
Fri May 29, 2020 1:50 pm
NRNGUI not working from command line after switch to zsh

Last post by ryang « Wed May 27, 2020 5:22 pm
Replies: 10
by sbrich » Fri Mar 13, 2020 3:24 pm

10 Replies

4087 Views

Last post by ryang
Wed May 27, 2020 5:22 pm
help installing on WSL

Last post by ramcdougal « Fri May 22, 2020 8:32 pm
Replies: 1
by jpduf » Fri May 22, 2020 12:11 pm

1 Replies

1585 Views

Last post by ramcdougal
Fri May 22, 2020 8:32 pm
Installation Help: Fail to "import neuron" in Python

Last post by byronprice « Thu Mar 26, 2020 11:18 am
Replies: 4
by byronprice » Thu Mar 19, 2020 12:42 pm

4 Replies

3422 Views

Last post by byronprice
Thu Mar 26, 2020 11:18 am
Failed to run neuron inside virtual environment in Ubuntu18 with Anaconda (PATH issue?)

Last post by nicholasmg « Sun Mar 01, 2020 1:15 pm
Replies: 3
by zoccoler » Tue Jan 14, 2020 2:20 pm

3 Replies

3444 Views

Last post by nicholasmg
Sun Mar 01, 2020 1:15 pm
How do I collect data for plots without IV

Last post by ramcdougal « Wed Feb 19, 2020 5:13 pm
Replies: 4
by itaru » Mon Feb 17, 2020 3:50 am

4 Replies

2154 Views

Last post by ramcdougal
Wed Feb 19, 2020 5:13 pm
NEURON installation on macOS Catalina

Last post by Lopreore « Mon Feb 10, 2020 2:47 pm
Replies: 8
by kellihancock » Fri Dec 20, 2019 9:01 am

8 Replies

7825 Views

Last post by Lopreore
Mon Feb 10, 2020 2:47 pm
Which environmental variables do I need to setup for NEURON to work after rpm installation without sudo with cpio

Last post by hines « Mon Dec 23, 2019 8:34 am
Replies: 1
by ziemek » Thu Dec 19, 2019 12:43 pm

1 Replies

1878 Views

Last post by hines
Mon Dec 23, 2019 8:34 am
CentOS with RxD and NEURON build from source

Last post by ramcdougal « Tue Dec 17, 2019 5:13 pm
Replies: 1
by ziemek » Tue Dec 17, 2019 11:54 am

1 Replies

1773 Views

Last post by ramcdougal
Tue Dec 17, 2019 5:13 pm
NEURON not working properly after update to Catalina and major troubleshooting!

Last post by sbrich « Thu Nov 21, 2019 1:37 pm
Replies: 3
by sbrich » Thu Nov 21, 2019 12:36 pm

3 Replies

2924 Views

Last post by sbrich
Thu Nov 21, 2019 1:37 pm
nrnivmodl missing -lX11

Last post by RobinDS « Wed Nov 20, 2019 3:30 pm
Replies: 1
by RobinDS » Wed Nov 20, 2019 3:10 pm

1 Replies

4015 Views

Last post by RobinDS
Wed Nov 20, 2019 3:30 pm
No module named hoc37

Last post by RobinDS « Fri Nov 15, 2019 7:22 am
Replies: 11
by RBJ » Sun Apr 21, 2019 10:15 am

11 Replies

10463 Views

Last post by RobinDS
Fri Nov 15, 2019 7:22 am
Problem importing NEURON in python

Last post by shhschen « Fri Nov 08, 2019 10:10 pm
Replies: 2
by hadas.manor » Sun Oct 13, 2019 8:08 am

2 Replies

2558 Views

Last post by shhschen
Fri Nov 08, 2019 10:10 pm
PyNeuron + Ubuntu + Python 3.6

Last post by hines « Fri Nov 01, 2019 9:17 am
Replies: 5
by ziemek » Thu Oct 31, 2019 10:05 am

5 Replies

3973 Views

Last post by hines
Fri Nov 01, 2019 9:17 am
Downloading NEURON5.9

Last post by ted « Tue Sep 24, 2019 11:38 am
Replies: 1
by Sun Xiaoqing » Tue Sep 24, 2019 3:28 am

1 Replies

4307 Views

Last post by ted
Tue Sep 24, 2019 11:38 am
Cannot find executable python3 or python

Last post by Sun Xiaoqing « Sun Sep 22, 2019 12:19 am
Replies: 2
by Sun Xiaoqing » Mon Sep 16, 2019 10:54 pm

2 Replies

4548 Views

Last post by Sun Xiaoqing
Sun Sep 22, 2019 12:19 am
cygwin vs msys file path changes, Windows NEURON version

Last post by ted « Sat Sep 07, 2019 3:37 pm
Replies: 1
by JimH » Thu Sep 05, 2019 11:40 pm

1 Replies

3435 Views

Last post by ted
Sat Sep 07, 2019 3:37 pm
Installation problem Neuron

Last post by wvangeit « Tue Aug 20, 2019 8:13 am
Replies: 36
by neuronakash » Mon Sep 10, 2018 4:12 pm
1

2

3
36 Replies

32581 Views

Last post by wvangeit
Tue Aug 20, 2019 8:13 am
code is incompatible with this neuron version

Last post by ted « Thu Aug 08, 2019 10:23 am
Replies: 1
by LauraD » Wed Aug 07, 2019 5:42 pm

1 Replies

2297 Views

Last post by ted
Thu Aug 08, 2019 10:23 am
Can't load from neuron.rxd.morphology

Last post by ramcdougal « Mon Jul 01, 2019 11:12 am
Replies: 1
by Elishai » Sun Jun 30, 2019 6:46 am

1 Replies

2240 Views

Last post by ramcdougal
Mon Jul 01, 2019 11:12 am
Problem installing on cluster

Last post by ted « Thu Jun 27, 2019 10:29 am
Replies: 2
by jtg374 » Tue Jun 25, 2019 11:17 pm

2 Replies

3495 Views

Last post by ted
Thu Jun 27, 2019 10:29 am

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