Search found 5685 matches

by ted
Fri May 20, 2005 9:15 pm
Forum: NEURON Announcements
Topic: NEURON 5.7.159
Replies: 0
Views: 14360

NEURON 5.7.159

On 4/22/2005 Michael Hines <michael.hines@yale.edu> wrote: Version 5.7.159 of NEURON is now available from http://www.neuron.yale.edu/neuron/install/install.html Some sticklers for detail may notice that the WWW site simply calls it 5.7, but will then draw reassurance from the fact that 159 appears ...
by ted
Fri May 20, 2005 1:51 pm
Forum: The GUI
Topic: Movie Run bug?
Replies: 1
Views: 6359

Movie Run bug?

On 5/20/2005 Michael Hines <michael.hines@yale.edu> wrote: The session file is incomplete. Add load_file("movierun.hoc") after the first line of your demo.hoc file. The movierun panel is not controlled by an object so there is no good way to add this to the session file and so I may have to load it ...
by ted
Fri May 20, 2005 1:50 pm
Forum: The GUI
Topic: Movie Run bug?
Replies: 1
Views: 6359

Movie Run bug?

I was using the GUI to set up a demo that involved the Movie Run tool (otherwise it executes too fast to see what happens). When everything was working properly, I did File / save session, which I thought would be able to recreate all of the graphical stuff (RunControl etc.). Later, when I retrieved...
by ted
Fri May 20, 2005 10:25 am
Forum: NEURON Announcements
Topic: NEURON 5.7.159 ModelDB autolaunch under mswin
Replies: 0
Views: 13913

NEURON 5.7.159 ModelDB autolaunch under mswin

On 5/2/2005 Michael Hines <michael.hines@yale.edu> wrote: Autolaunching ModelDB models under mswin with NEURON version 5.7.159 and Internet Explorer fails due to mishandling spaces in file paths. This problem can be fixed by uninstalling the old version and re-installing http://www.neuron.yale.edu/f...
by ted
Fri May 20, 2005 10:15 am
Forum: Other questions
Topic: Symptom: calling run() changes dt
Replies: 0
Views: 2990

Symptom: calling run() changes dt

A NEURON user reported the following: > I set the dt to 0.1, when I use run() in a prcedure written by me > the progrm writes me 'dt changed' and use dt=0.025. > What is the best way to make it run with dt=0.1 ? > (I'm not using the RunControl Panel) On 5/4/2005 Michael Hines <michael.hines@yale.edu...
by ted
Fri May 20, 2005 9:58 am
Forum: UNIX/Linux
Topic: Installing v. 5.7.159 under Debian
Replies: 2
Views: 4792

Installing v. 5.7.159 under Debian

On 5/20/2005 Michael Hines <michael.hines@yale.edu> wrote: > The problem of building NEURON from the sources with a configuration > option --with-iv has been fixed. You can get the new tar.gz file from > http://www.neuron.yale.edu/ftp/neuron/versions/alpha/nrn-5.8.7.tar.gz > Don't worry about the ve...
by ted
Thu May 19, 2005 10:11 pm
Forum: Adding new mechanisms and functions to NEURON
Topic: Where to learn about mod files and NMODL
Replies: 0
Views: 27265

Where to learn about mod files and NMODL

mod files contain code in NMODL (NEURON Model Description Language), which is used to add new biophysical mechanisms to NEURON. For general information about mod files go to the FAQ list http://www.neuron.yale.edu/neuron/faq/general-questions and look at these items Where can I find examples of mod ...
by ted
Thu May 19, 2005 10:02 pm
Forum: Specific models
Topic: Cerebellar Purkinje cell
Replies: 1
Views: 15786

Cerebellar Purkinje cell

On 5/16/2005 Sheng-Chun Yen <shengchy@usc.edu> wrote: > I am very interested in if NEURON can simulate Purkinje cell of > cerebelum. Was there any research about it? On 5/16/2005 Ted Carnevale <ted.carnevale@yale.edu> wrote: > It can. Whether anyone has built such a model I don't know. > Have you ch...
by ted
Thu May 19, 2005 9:43 pm
Forum: Adding new mechanisms and functions to NEURON
Topic: How to cite NMODL
Replies: 0
Views: 3150

How to cite NMODL

On 5/9/2005 Carl Gold <carlg@caltech.edu> wrote: > I have used the cadifus mechanism of calcium accumulation with > longitudinal and radial diffusion in my model. What paper/book should I > reference? Would that be Expanding NEURON's Repertoire of Mechanisms > with NMODL? That would do. The complete...
by ted
Thu May 19, 2005 6:28 pm
Forum: UNIX/Linux
Topic: Installing v. 5.7.159 under Debian
Replies: 2
Views: 4792

Installing v. 5.7.159 under Debian

On 5/19/2005 Quan.Zou@iaf.cnrs-gif.fr wrote: > I just compiled the lastest neuron under debian 2.4.xx kernel > --with-iv supported. > > But, when I try to "configure --without-iv or --without-x, and make" > produce errors. It complains that some header files such as > tformsetter.h, window.h and act...
by ted
Thu May 19, 2005 9:29 am
Forum: The GUI
Topic: Increment used by spinner
Replies: 1
Views: 4528

Increment used by spinner

On 5/17/2005 Michael Moffitt <MMoffitt@advancedbionics.com> wrote: > Is there a way I can set the step size used by widget buttons? > In particular, the widget button used with 'xvalue' in an 'xpanel.' You mean the increment size used by the "spinner" widget (button with paired up & down arrows)? Ri...
by ted
Thu May 19, 2005 9:11 am
Forum: Other questions
Topic: Vector play
Replies: 0
Views: 3192

Vector play

On 5/18/2005 llaraw@actrix.co.nz wrote: > I am having problems using the vector functions e.g play in NEURON 5.7, > this is with code that worked under NEURON 5.4 but it returns an error along > the lines of 'too few parameters' when I try and run the same code under > NEURON 5.7. Has the syntax of ...
by ted
Thu May 19, 2005 2:19 am
Forum: Other questions
Topic: Modeling Smooth Muscle Cell
Replies: 0
Views: 2910

Modeling Smooth Muscle Cell

Jeff Hatton <jhttn@comcast.net> wrote: > Is it possible or feasible to model a smooth muscle cell using Neuron > since they have roughly the same physical structure as an axon. I > wish to model electrical potiential along a smooth muscle cell and > was curious if Neuron would be able to do such a t...
by ted
Thu May 19, 2005 1:52 am
Forum: Goals and Policies
Topic: Policies
Replies: 0
Views: 59395

Policies

1. Please try to post your messages to the relevant discussion group. 2. Collegial behavior is the expected norm. Other fora admonish against spam, flaming, verbal abuse, obscenity, copyright violation, etc., but we hardly think it necessary here. In the unlikely event of such unwelcome behavior, th...
by ted
Wed May 18, 2005 9:31 pm
Forum: Goals and Policies
Topic: Welcome to the NEURON Forum
Replies: 0
Views: 20696

Welcome to the NEURON Forum

What are the goals of the NEURON Forum? The primary goal of the NEURON Forum is to facilitate the exchange of information about NEURON. We also hope it will foster the productive use of computational modeling in neuroscience in general. Who can read these discussions? Anyone can read a discussion t...