Search found 1686 matches
- Sat Jul 22, 2006 10:21 am
- Forum: Parallel NEURON
- Topic: How to write a parallel FitnessPrimitive
- Replies: 5
- Views: 14302
That was inadvertently left out. I will have to add the save_context, restore_context pair to that class. Or you can try to do it in nrn/lib/hoc/mulfit.hoc/eoneprim.hoc in analogy to eonefunc.hoc. I believe mere empty stubs are not sufficient. But are you sure that your fitting project is significan...
- Wed Jul 12, 2006 7:21 am
- Forum: NEURON + Python
- Topic: Tip of the day
- Replies: 11
- Views: 16019
Andrew is correct, all the python code fro NEURON is in the tar.gz file. But to answer your question about CVS. Anonymous CVS broke when the old server broke a month ago and I have not bothered to set it up on the temporary server since I have switched to Subversion. I just have been remiss in updat...
- Tue Jul 11, 2006 8:51 am
- Forum: Getting started
- Topic: matlab-neuron
- Replies: 3
- Views: 11932
It is simpler if you can turn things around and have Matlab control NEURON. I presume Matlab can interact with a process via stdin/stdout and you would start NEURON with the string nrniv -nogui -isatty But if your project is conceptually simpler with Matlab controlled by NEURON then you can have NEU...
- Wed Jun 21, 2006 4:52 pm
- Forum: MSWin
- Topic: Question about getting Neuron run on Grid
- Replies: 1
- Views: 4992
In principle all you need is c:\nrn59\bin\nrniv.exe and a hoc file which defines the model. In practice you will have to add the nrnmech.dll that gives you your channels unless you were able to define everything with the ChannelBuilder. If you do not use Bill Lytton's loadfiles script that puts all ...
- Wed Jun 07, 2006 11:30 am
- Forum: MSWin
- Topic: Distributed Mechanism buttons don't work
- Replies: 3
- Views: 6647
oc: Device or resource busy is probably benign and I believe something has set the errno unexpectedly but without failing. The only possible remedy to avoid the message is for me to ignore that particular errno but that may be a mistake on my part if the device or resource is permanently busy. cann...
- Mon Jun 05, 2006 8:17 pm
- Forum: MSWin
- Topic: Compiling NEURON under WinXP
- Replies: 7
- Views: 9489
- Thu Jun 01, 2006 9:17 am
- Forum: Other questions
- Topic: neuron-matlab interface
- Replies: 4
- Views: 6588
Code: Select all
ssh -X localhost nrniv -isatty
- Tue May 30, 2006 2:48 pm
- Forum: UNIX/Linux
- Topic: Neuron and Myrinet
- Replies: 7
- Views: 10865
We are going to have to straighten that out. That is a piece of code that is never supposed to be compiled because HAVE_STL is required nowadays.
Lets deal with this by email. Please send your src/parallel/bbsconf.h file to michael.hines@yale.edu.
Lets deal with this by email. Please send your src/parallel/bbsconf.h file to michael.hines@yale.edu.
- Tue May 30, 2006 12:58 pm
- Forum: UNIX/Linux
- Topic: Neuron and Myrinet
- Replies: 7
- Views: 10865
- Tue May 30, 2006 11:00 am
- Forum: UNIX/Linux
- Topic: Neuron and Myrinet
- Replies: 7
- Views: 10865
- Sun May 28, 2006 5:27 pm
- Forum: UNIX/Linux
- Topic: Neuron and Myrinet
- Replies: 7
- Views: 10865
The problem is not the #if !ALWAYS_CALL_MPI_INIT code section. In fact everything is working in your example except for the benign but annoying error messages. They may just go away if you upgrade to 5.9. If not let me know. Usually the problem traces to failing to reset errno=0 after a call to an m...
- Wed May 24, 2006 6:11 pm
- Forum: Getting started
- Topic: Neuron simulator in Windows - two questions
- Replies: 1
- Views: 3788
Of the functions in the neuron executable, only the ones listed in nrn/src/mswin/windll/nrnmech.h and nrnmath.h can be called. You can call functions directly linked with libraries during the building of the nrnmech.dll file as well but that is not often done. ModelDB has an example of a mod file (v...
- Tue May 23, 2006 6:04 am
- Forum: Other questions
- Topic: Strange CVode constructor behavior
- Replies: 2
- Views: 3511
- Fri May 19, 2006 6:19 pm
- Forum: OS X
- Topic: OSX 10.4.6 compiling mod files
- Replies: 4
- Views: 8116
The nrn-5.8.88 predates the release of i686-apple-darwin
One of the dmg files for apple OS X in the http://www.neuron.yale.edu/ftp/neuron/versions/alpha/
is for the powerpc and one is for the i686. Try http://www.neuron.yale.edu/ftp/neuron/v ... n8.6.1.dmg
One of the dmg files for apple OS X in the http://www.neuron.yale.edu/ftp/neuron/versions/alpha/
is for the powerpc and one is for the i686. Try http://www.neuron.yale.edu/ftp/neuron/v ... n8.6.1.dmg
- Fri May 19, 2006 6:10 pm
- Forum: Optimization
- Topic: Out of range variables in MRF
- Replies: 1
- Views: 4967
Edit the nrn/lib/hoc/mulfit/eparmlst.hoc file and search forIs there a way to circumvent this problem when setting positivle limits on optimized variables?
Code: Select all
func efun()
Code: Select all
printf("invalid %s low=%g val=%g high=%g\n",...