Search found 34 matches

by ziemek
Thu Nov 14, 2019 7:41 am
Forum: Adding new mechanisms and functions to NEURON
Topic: Calcium diffusion and shells
Replies: 5
Views: 596

Calcium diffusion and shells

Hi there, Is there any easy way to implement in NEURON a Calcium diffusion with shells similar in concept to the figure 6.8 from the Principles of Computational Modelling in Neuroscience, Sterrat et al. : https://drive.google.com/file/d/13YeDmGO26dwu-T63HEbbae_K6BQPVVdB/view (image) I would be very ...
by ziemek
Thu Oct 31, 2019 12:21 pm
Forum: UNIX/Linux
Topic: PyNeuron + Ubuntu + Python 3.6
Replies: 5
Views: 1829

Re: PyNeuron + Ubuntu + Python 3.6

Well obviously I did it after a fresh installation of NEURON Python couldn't find the neuron library, that's the problem. I use Anaconda, but it shouldn't be an issue. After I downloaded the source code from the github, compile it and then install nrnpython by hand - it finally started to work :) Bu...
by ziemek
Thu Oct 31, 2019 10:48 am
Forum: UNIX/Linux
Topic: PyNeuron + Ubuntu + Python 3.6
Replies: 5
Views: 1829

Re: PyNeuron + Ubuntu + Python 3.6

Thank's for quick answer, but is there any supported way to use NEURON with Python? Well, at least according to this simple QuickStart: https://www.neuron.yale.edu/ftp/neuron/2019umn/neuron-quickstart.pdf after a fresh NEURON installation Python libs should just work, but not for me since I have: >>...
by ziemek
Thu Oct 31, 2019 10:05 am
Forum: UNIX/Linux
Topic: PyNeuron + Ubuntu + Python 3.6
Replies: 5
Views: 1829

PyNeuron + Ubuntu + Python 3.6

Hi there, I Try to install neuron for Python on Ubuntu 16.04 and Python 3.6 with command: pip install neuron but I received this error: Only Windows and 64-bit Linux currently supported by PyNEURON The error is strange since I have 64-bit Ubuntu. Then I tried with: pip install pyneuron and now the e...