Search found 34 matches

by bschneiders
Tue Apr 18, 2017 10:32 am
Forum: Reaction-diffusion in NEURON
Topic: Modeling extracellular space and a plasma membrane
Replies: 3
Views: 10695

Re: Modeling extracellular space and a plasma membrane

Thank you, this is very helpful. I will just use a MOD file for the pump instead. I will follow up if we decide to look into your experimental package for diffusion in extracellular space. Thanks!
by bschneiders
Tue Apr 04, 2017 5:34 pm
Forum: Reaction-diffusion in NEURON
Topic: Modeling extracellular space and a plasma membrane
Replies: 3
Views: 10695

Modeling extracellular space and a plasma membrane

I have several questions regarding extracellular space and the plasma membrane using RxD. First of all, I've seen reference to extracellular space as a possible RxD conceptual region in the RxD documentation, but haven't seen an example of it actually defined. Is the best way to define it simply the...
by bschneiders
Fri Mar 10, 2017 11:02 am
Forum: NEURON + Python
Topic: Modifying v_init
Replies: 2
Views: 11033

Re: Modifying v_init

Setting h.v_init = -61 worked, thank you!
by bschneiders
Thu Mar 09, 2017 5:04 pm
Forum: NEURON + Python
Topic: Modifying v_init
Replies: 2
Views: 11033

Modifying v_init

Hi all, I am having trouble setting v_init to something other than the default value before running a simulation. In Python, I tried the following: h.finitialize(-61) h.run() but somehow the voltage still starts at -65. I then tried using the init() function (with "neuron." and with "h." prefixes, w...