www.neuron.yale.edu

Note that there is a NetPyNE example (Jupyter notebook) of making a movie out of RxD concentrations:
https://github.com/suny-downstate-medic ... _tut.ipynb

That may be a good starting point.

NetPyNE v1.0.1 is now available. For a complete list of changes and bug fixes see: https://github.com/Neurosim-lab/netpyne/releases/tag/v1.0.1 See here for instructions to install or update to the latest version: http://www.netpyne.org/install.html New features - Added new plotting module with cust...

NetPyNE v1.0.0 is now available. For a complete list of changes and bug fixes see: https://github.com/Neurosim-lab/netpyne/releases/tag/v1.0.0 See here for instructions to install or update to the latest version: http://www.netpyne.org/install.html New features - Added wrapper for distributed savin...

NetPyNE v0.9.9.1 is now available. For a complete list of changes and bug fixes see: https://github.com/Neurosim-lab/netpyne/releases/tag/v0.9.9.1 and https://github.com/Neurosim-lab/netpyne/releases/tag/v0.9.9 For instructions to install or update NetPyNE to the latest version: http://www.netpyne....

NetPyNE v0.9.8 is now available. For a complete list of changes and bug fixes see: https://github.com/Neurosim-lab/netpyne/releases/tag/v0.9.8 See here for instructions to install or update to the latest version: http://www.netpyne.org/install.html NetPyNE Version 0.9.8 New features - analysis.plotL...

We have released NetPyNE version 0.9.7, which includes some major improvements: - All analyses functions can now generate interactive HTML plots (via Bokeh package) - Online documentation and tutorials have been updated and expanded (see http://www.netpyne.org/) - Simplified cell type specification ...

# Version 0.9.6 https://github.com/Neurosim-lab/netpyne/releases/tag/v0.9.6 - Added useful hover information to iplots - Improvements to iplotTraces - Added interactive plot for connectivity (iplotConn) - Added 'dynamicRates' option for NetStim populations - Added option to have a uniform distributi...