Search found 6 matches

by crepatas
Tue Jun 06, 2006 12:19 pm
Forum: Other questions
Topic: CVode and at_time problem
Replies: 1
Views: 3610

CVode and at_time problem

I am using the Kampa release.mod file. It seems I am introducing some bugs so that the variable time step will not work correctly. If I use any delay other than zero NEURON will miss the release completely. I added the code which work correctly with fixed time steps, but does not with variable step....
by crepatas
Thu Mar 30, 2006 4:08 pm
Forum: Optimization
Topic: MultupleRunFitter[0]Generators output differs from sims
Replies: 2
Views: 6354

MultupleRunFitter[0]Generators output differs from sims

I'm optimizing a NMDA glycine channel. I have 4 curve responses at different Glycine concentrations. At the end of the optimization I get quite a good fit within the multipleRunfitter window. But when I try to run the same simulation outside the runFitter I get quite a different response: in particu...
by crepatas
Fri Mar 17, 2006 8:54 pm
Forum: MSWin
Topic: Compiling NEURON under WinXP
Replies: 7
Views: 9593

In my config.h there is no #define RETSIGTYPE void This is my config.h: Crepatas PS: I redownloaded the iv-17, unzipped with winzip under Winxp and ran: ./configure --prefix=`pwd` /* config.h. Generated by configure. */ /* config.h.in. Generated from configure.in by autoheader. */ #ifndef H_config_i...
by crepatas
Fri Mar 17, 2006 11:09 am
Forum: MSWin
Topic: Compiling NEURON under WinXP
Replies: 7
Views: 9593

If there is any demand, then perhaps I can supply an appropriate setup.exe someday. PS: it would be great to have a setup.exe with multi processor support for WinXP. I'm sure a significant amount of people either have Pentium 4 with Hyperthreads activated or some of the latest dual-core CPU. In my ...
by crepatas
Fri Mar 17, 2006 11:06 am
Forum: MSWin
Topic: Compiling NEURON under WinXP
Replies: 7
Views: 9593

Compiling NEURON under WinXP

I tried to follow instructions and recompile NEURON. Unfortunately I have problems even with the first make of IV compilation. This is the ./configure log: $ ./configure --prefix=`pwd` checking build system type... i686-pc-cygwin checking host system type... i686-pc-cygwin CYGWIN=yes checking for g+...
by crepatas
Wed Mar 15, 2006 10:29 am
Forum: Optimization
Topic: Parallel Run fitter on Win Xp
Replies: 1
Views: 5154

Parallel Run fitter on Win Xp

I have a desktop dual-core dual CPUs for a total of 4 core running Win XP. At the moment I run Neuron 5.8.88 using only one of the core.

Is it possible to run all 4 cores to speed up optimization? If so how can I do that in WinXP?

Thanks
Crepatas