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Dear Ted I have sent my code to your e-mail. But I seem to have found the problem in my code. "h.celsius" should not be placed after "h.finitialze()". I noticed that "h.celsius()" was used in "h.finitialize()" for the NMODL (.mod file) initialization. I misund...

The problem was not resolved. As I mentioned above, even if I set up "h.celsius" properly, there is still a problem where the execution results of the HOC and Python code are different. The cause of the problem seems to be in the "hh2.mod" file. This problem did not occur when t...

I debug using the method you suggested. This problem is not due to a programmatic error, but entirely to my mistake. The cause of the problem was the execution order of the Python code I wrote. From the Python code I wrote, h.finitialize(-65) h.dt = 0.2 h.continuerun(50) h.celsius = 30 In order for ...

Hello, I wrote a simple simulation code in two different versions (Python, HOC). I'm curious as to why the execution results are different. The content of the simulation code is to provide a step current input to a single compartment cell model and to draw a graph of the membrane potential. The code...

Thank you very much!

In my case, I can script running of nrniv with -c option. Thank you for the information.

Sincerely,

Kisung Shin

Hello, I am trying Python scripting to do multiple simulations by modifying only a few parameters in one hoc code. I usually type the following command in terminal on Ubuntu Linux when running NEURON. nrniv mosinit.hoc or nrngui mosinit.hoc Can the "nrniv" or "nrngui" command acc...

I think it will be very helpful for my study!

Thank you for the information.

Sincerely,

Kisung Shin

Hello, I am trying to implement synaptic mechanism in .mod file using NMODL. However, neither the NEURON book nor the documentation at NEURON HOC documentation(https://neuronsimulator.github.io/nrn/new_doc/index.html) seems to have an explanation of the each syntax like "net_send()" or &qu...