www.neuron.yale.edu

Hi all! After 3 days of pain, horror, sleep deprivation and other atrocities, I was able to install Neuron in my machine. The story is more or less like this: I had worked with python packaged installed by hand (pip install package), and I didn't want to waste time in installing every package that I...

Hello RBJ
I am having the EXACT problem, but running on OS X El Capitán.
Could you please, post exactly what you did in order to solve the issue?

do you know what those obscure headers do? (Xext.h and shape.h)

I take it slowly this time. It was the lack of command tools, as you told in your link.
I uninstalled neuron, installed Command Tools, and reinstaled neuron. Now it works almost perfect (no mpi, but it is not critical).
Thank you!

I've look the pdf. As far as I understand, it says that I must install command line tools from XCode, which I have Javier@Javiers-MacBook-Pro:/Applications/NEURON-7.4/nrn/share/nrn$ which libtool /usr/bin/libtool what puzzles me is this line, when trying to compile a mod file /bin/sh: /Applications/...

Dear all, Because of several issues with my computer, I had to install neuron all over again. My computer runs last version of El Capitan. I followed the install walkthrough posted on https://www.neuron.yale.edu/neuron/download/compilestd_osx The installing process was smooth, except for the make in...

After taking a break off trying to install NEURON, the issue was solved with the help of my friends </beatles>. It seems that there is something strange with my home path, which is not in /Users/whatever but instead is in /Volumes/Macintosh HD/myHome. Apparently this was the issue because the compil...

Sorry, I've been quite busy this days. I hope tomorrow I could run and check once more time my issues and give you a propper answer.
Thank you for the advices

I did exactly what you told me. Javier@MacBook-Pro-de-Javier:~/neuron/iv$ sudo ln -s /Volumes/Macintosh\ HD/ /Volumes/Macintosh_HD Javier@MacBook-Pro-de-Javier:~/neuron/iv$ export IDIR=/Volumes/Macintosh_HD/Javier/Applications/Neuron Javier@MacBook-Pro-de-Javier:~/neuron/iv$ sh ./build.sh glibtooliz...

Ok, I'm puzzled now. I did a simbolic link. I'm going to detail every step, in case I did something wrong. so the first thing was to make a folder in /Volumes. $sudo mkdir /Volumes/Macintosh $sudo ln -s /Volumes/Macintosh\ HD/Javier /Volumes/Macintosh Javier@MacBook-Pro-de-Javier:/Volumes$ ls Macint...

Thank you. Will try it tomorrow

I tried several configurations on IDIR. I used: IDIR=/Volumes/Macintosh\ HD/Javier/Applications/Neuron IDIR='/Volumes/Macintosh HD/Javier/Applications/Neuron' IDIR="/Volumes/Macintosh HD/Javier/Applications/Neuron" IDIR=/Volumes/Macintosh*HD/Javier/Applications/Neuron I tried passing the a...

Dear all, I am having issues instaling Neuron in my Mac. I am currently running OSX ver 10.11.1(aka El Capitan). My machine is a MacBook Pro with two hard drives (Macintosh HD and Macintosh SSD) I need to use Neuron with python, so I am following the walkthrough shown in https://www.neuron.yale.edu/...