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I figured out one way of doing this

Hi, Is there a way to find out programatically the names of the mechanisms in a section? I would of thought that the MechanismType class would have a function for this (it has one for point processes). It does have some (count and select), but they refer to the available mechs, not the ones in a giv...

Hi all, Any ideas on why the following examples don't work? Thanks in advance, Jose Ambros-Ingerson PS. I'm running OSX 10.4.11 on Intel and G5 -------- example 1------------- begintemplate aT proc init(){ create d1[2] } proc many(){ create d1[20] } endtemplate aT objref a a = new aT() a.many() $ nr...

Is there a simple way to get the axes labels right when plotting as you suggest?

Thanks,
Jose

I get similar errors with make install: /usr/bin/install -c .libs/liboc.lai /home/ohu0256/Software/src/Neuron/bale/nrn/x86_64/lib/liboc.la PATH="$PATH:/sbin" ldconfig -n /home/ohu0256/Software/src/Neuron/bale/nrn/x86_64/lib ../../libtool: line 6156: 29570 Segmentation fault PATH="$PAT...

Hi, I'm trying to install neuron with no-gui in a Linux x86_64 machine for which I have no root access. $ uname -a Linux bale-login 2.6.18-8.1.8.el5 #1 SMP Mon Jun 25 17:06:07 EDT 2007 x86_64 x86_64 x86_64 GNU/Linux $ tar xzf nrn-6.0.tar.gz $ mv nrn-6.0 nrn $ cd nrn $ ./configure --prefix=`pwd` --wi...

I tried your suggestion for building Interviews. However, it failed to build a universal libIVhines.3.0.3.dylib $ IDIR=~/Software/bin/nrn-6.0-universal $ cd iv-17/ $ ./configure --prefix=$IDIR/iv --with-x CFLAGS="-arch ppc -arch i386" CXXFLAGS="-arch ppc -arch i386" $ make This f...

I tested alpha/nrn-6.0.rel-4-i386-apple-darwin8.10.1.dmg OS X Server 10.4.10 (intel) installed in ~/Applications $ ~/Applications/NEURON-6.0/nrn/i386/bin/nrniv dyld: Library not loaded: /Applications/NEURON-6.0/nrn/i386/lib/libnrnoc.0.dylib Referenced from: /axon/d1/Users/jose/Applications/NEURON-6....

Has anybody tried to build a NEURON universal binary for 10.4 ? Is there reason that this will or will not work? Presumably, adding the option "-arch ppc -arch i386" to gcc 4.0 should be enough. Is there a simple way of doing this when building NEURON from source? Why do I want to do this?...

I'm looking for some documentation of the command line options of nrniv. I know you can use -NSTACK xxx -NFRAME xxx In particular, I'm looking for a way to tell nrniv not to attempt to set the X11 display variable. Is there such thing? I know you can do this when building nrniv. I'm trying to find o...

Hi, I'm getting weird results with strcmp. See below. It happens with 5.8 and 5.9 in OSX 3.9 and 4 (details below). However, it seems OK in Linux (details below) Any idea how to fix this? $ uname -a Darwin firestone.sf.osc.edu 8.8.0 Darwin Kernel Version 8.8.0: Fri Sep 8 17:18:57 PDT 2006; root:xnu-...

Making sure that h (and n) are not negative solved the problem.

I wasn't aware that the 'h' in the message related to a variable in the mod file. My impression (wrongly) was that it referred to some cvode internal variable.

Thanks very much for your help

Hi, I'm getting this error numerous times in my paralle search runs. I was able to isolate it so that it can be reproduced with the following files. Any help in finding out what causes this error would be appreciated. Thanks, Jose Ambros-Ingerson create soma access soma //---------------------------...

-without-memacs configure option did the trick. I was able to make nrniv with no gui. Thanks. PS. I did get a few warnings firestone:~/Software/src/Neuron/nrn ohu0256$ make > make.out In file included from init.c:59: osxdlfcn.c: In function `dlopen': osxdlfcn.c:118: warning: passing arg 2 of `_dyld...

Today I tried to install the nrn-5.9.39-powerpc-apple-darwin8.6.0.dmg on the Ohio Supercomputer center (OSC) G5 OSX 10.4. I used $ hdiutil attach nrn-5.9.39-powerpc-apple-darwin8.6.0.dmg to mount the dmg. However, I wasnt able to start the executables. I get the following error: $ /Volumes/NEURON-5....