Search found 6 matches

by claudioez
Thu Apr 19, 2018 11:05 am
Forum: NEURON + Python
Topic: gui not accessible and graphs not updating while running simulations from Python
Replies: 8
Views: 1676

Re: gui not accessible and graphs not updating while running simulations from Python

Hi,

indeed it runs without memory problems if I don't use thE workaround, but crashes when I do use it.

I am running just one simulation, CPU is only 3% used but memory fully used after some minutes.

I will send you the files, thanks! =)
by claudioez
Thu Apr 19, 2018 7:12 am
Forum: NEURON + Python
Topic: gui not accessible and graphs not updating while running simulations from Python
Replies: 8
Views: 1676

Re: gui not accessible and graphs not updating while running simulations from Python

Dear ramcdougal, indeed that stops the problem of the neurongui being stuck, but at the same time creates a problem with memory management as it continuously stores data in the memory until 100% is used and eventually python crashes (I have 64 GB of RAM). Another symptom is that although the gui is ...
by claudioez
Tue Apr 17, 2018 11:04 am
Forum: NEURON + Python
Topic: gui not accessible and graphs not updating while running simulations from Python
Replies: 8
Views: 1676

Re: gui not accessible and graphs not updating while running simulations from Python

It is not Spyder-specific. From the python prompt the behavior is the same. OS: Windows 10 Pro for workstations, 64 bits Neuron: VERSION 7.5 master (6b4c19f) 2017-09-25 I was wondering if it´s maybe a normal python behavior (first time I program in python), and this can be solved by using different ...
by claudioez
Tue Apr 17, 2018 9:42 am
Forum: NEURON + Python
Topic: gui not accessible and graphs not updating while running simulations from Python
Replies: 8
Views: 1676

gui not accessible and graphs not updating while running simulations from Python

Hi, I am migrating from hoc based control of Neuron, to a Python + hoc system. I am now able to run the simulations as I wanted and record the results. I am using Spyder for writing and to execute the commands. I initiate the model using: from neuron import h, gui import numpy import matplotlib.pypl...
by claudioez
Tue Oct 28, 2014 12:52 pm
Forum: Getting started
Topic: Updating procedures
Replies: 2
Views: 946

Re: Updating procedures

Thanks Ted, that worked perfectly.
by claudioez
Tue Oct 28, 2014 6:55 am
Forum: Getting started
Topic: Updating procedures
Replies: 2
Views: 946

Updating procedures

Dear Ted, Probably this question came up before but I couldn´t find it. Being a total newbie, I created a GUI (using xpanel) that suited my particular needs for exploratory experiments. I start neuron by loading a set of .hoc files that contain procedures for topology, biophysics, panels, point proc...