Search found 11 matches

by divyeshsah_89
Tue Apr 27, 2010 7:27 am
Forum: The GUI
Topic: How to get the prototype structure to print
Replies: 1
Views: 5052

How to get the prototype structure to print

Sir, i have made a prototype stucture in a session file for my work. Now for documentation i wanted to print it how can i get it out of the neuron GUI for print & using it in paint.please let me know the proper path for doing it.
by divyeshsah_89
Fri Apr 09, 2010 10:35 am
Forum: ModelDB and other online sources of models
Topic: hoc file conversion....
Replies: 9
Views: 17532

Re: hoc file conversion....

Well sir i tried doing it thruogh the same but when u see the hoc code u will find the goemetry like nseg ,L and dia are lost . sir can u please send me the hoc file directly through mail as i am facing time constraint to complete my project.I want the hoc file for n121 CA1 neuron.can u do that plea...
by divyeshsah_89
Fri Apr 09, 2010 1:51 am
Forum: ModelDB and other online sources of models
Topic: hoc file conversion....
Replies: 9
Views: 17532

Re: hoc file conversion....

thank you for the help. i could almost understand what you replied except for using the pt3d functions. also could you please tell me how to save the save the geometry once i get using the psection()..please if you could tell me how to exactly retain the entire geometry cause i can only avail the ge...
by divyeshsah_89
Wed Apr 07, 2010 10:51 pm
Forum: ModelDB and other online sources of models
Topic: hoc file conversion....
Replies: 9
Views: 17532

Re: hoc file conversion....

Sir, i tried to get the file in cell builder. but the dimensions are not being loaded into the cell builder. I used the method mentioned in tutorial.then when in cell builder i tried to view the celll geometry it was not there & only the default values used to come like dia=1 & L=100micrometers. Si...
by divyeshsah_89
Wed Apr 07, 2010 10:41 pm
Forum: ModelDB and other online sources of models
Topic: hoc file conversion....
Replies: 9
Views: 17532

Re: hoc file conversion....

Sir, i tried to get the file in cell builder. but the dimensions are not being loaded into the cell builder.
I used the method mentioned in tutorial.then when in cell builder i tried to view the celll geometry it was not there & only the default values used to come like dia=1 & L=100micrometers.
by divyeshsah_89
Wed Apr 07, 2010 7:01 am
Forum: ModelDB and other online sources of models
Topic: hoc file conversion....
Replies: 9
Views: 17532

hoc file conversion....

Hey Ted, I have been trying to load a neuron morphology in .hoc format. but i fail to do so. All the files that are available online are in the swc format. I tried to load it through import 3D but the geometry of the structure i lost. i have downloaded this morphology from Duke south hampston archiv...
by divyeshsah_89
Mon Apr 05, 2010 11:27 am
Forum: Specific models
Topic: How to incorporate a file in GUI
Replies: 1
Views: 10732

How to incorporate a file in GUI

I already have a created geometry file from a model db in n160_mod.nrn. i am working on GUI of neuron.how will i be able to upload this geometric structure in Gui cell builder.how can i get that topological structure?
by divyeshsah_89
Fri Apr 02, 2010 2:01 am
Forum: The GUI
Topic: Not finding a axonal section in the imported 3D structure
Replies: 3
Views: 2365

Re: Not finding a axonal section in the imported 3D structure

Thank you for your reply.
But then structure which u gave now does not have apical dendrities.
I am working on BAP & memory retention in CA1.I am only concentrating on one type of channel i.e. Atype-Transient K+ channel so do u think its ok if i dont have a subset with name axon.
by divyeshsah_89
Thu Apr 01, 2010 8:07 am
Forum: The GUI
Topic: Not finding a axonal section in the imported 3D structure
Replies: 3
Views: 2365

Not finding a axonal section in the imported 3D structure

I downloaded the 3D structure from the site neuromorpho.org in the swc format & tried to import it in the cell builder. But a problem came that when i saw the subsets part of cell builder i was not able to identify the axon.the parts were " all, somatic, basal & apical. So please help me how can i m...
by divyeshsah_89
Thu Apr 01, 2010 8:02 am
Forum: The GUI
Topic: How to get a reconstruction of CA1
Replies: 2
Views: 2204

Re: How to get a reconstruction of CA1

Thank you the help ..
by divyeshsah_89
Sat Mar 20, 2010 6:18 am
Forum: The GUI
Topic: How to get a reconstruction of CA1
Replies: 2
Views: 2204

How to get a reconstruction of CA1

I am new to neuron software.So i would like to know whether should i use GUI or coding as a starter to use the neuron software.. ALso how can i get the anatomical reconstructed morphology of CA1 pyramidal neuron