I was able to install NEURON without Interviews with the --without-x option, but in addition to the CXX I needed to specify the CC as well. After some minor troubleshooting issues, everything now works. Thanks!
Calvin
Search found 6 matches
- Fri Aug 21, 2009 4:20 pm
- Forum: Parallel NEURON
- Topic: Use a parallel compiler with NEURON?
- Replies: 4
- Views: 3123
- Thu Aug 20, 2009 6:52 pm
- Forum: Parallel NEURON
- Topic: Use a parallel compiler with NEURON?
- Replies: 4
- Views: 3123
Re: Use a parallel compiler with NEURON?
Hi Michael, I'm working with Marianne on setting up this cluster with the parallel compiler, and I am receiving the following error during make for the installation of InterViews 17: /opt/pgi/linux86-64/9.0/bin/pgCC -DHAVE_CONFIG_H -I. -I. -I../include -g -c Unidraw/catalog.cpp -fpic -DPIC -o Unidra...
- Mon Jul 20, 2009 1:52 pm
- Forum: Parallel NEURON
- Topic: nrniv -mpi Error
- Replies: 4
- Views: 3295
Re: nrniv -mpi Error
You were 100% correct. The mpic++ file was not found in the mpich2 directory and copying the mpicxx and reinstalling worked. You guys are amazing, thanks!
- Sat Jul 18, 2009 6:51 pm
- Forum: Parallel NEURON
- Topic: nrniv -mpi Error
- Replies: 4
- Views: 3295
Re: nrniv -mpi Error
Hi Ted,
With NEURON 7.0, I get the same error. I'm trying to get parallel NEURON to work on the two-processor computer before I try to set it up in a cluster. Any suggestions for what I could do to try to fix the error? Thanks.
With NEURON 7.0, I get the same error. I'm trying to get parallel NEURON to work on the two-processor computer before I try to set it up in a cluster. Any suggestions for what I could do to try to fix the error? Thanks.
- Thu Jul 16, 2009 8:13 pm
- Forum: Parallel NEURON
- Topic: nrniv -mpi Error
- Replies: 4
- Views: 3295
nrniv -mpi Error
I downloaded and installed NEURON 6.0 following Hines, M.L. and Carnevale, N.T. "Translating network models to parallel hardware in NEURON" on a Fedora Core release 3 unit with 2 processors (with the --with-paranrn configure option, etc). I received the correct output for the MPICH2 cpi ex...
- Thu Jul 09, 2009 6:42 pm
- Forum: Parallel NEURON
- Topic: "Number of User Partition Cells" Error
- Replies: 1
- Views: 1909
"Number of User Partition Cells" Error
So I am new to NEURON and I have been running the parallel models in the ModelDB to learn parallel NEURON 7.0 on my Windows Vista OS (yeah I know...) before I attempt to learn it for UNIX. For the Migliore et al 2006 (Accession Number 64229), I have been trying to run the parallel version of the den...