NEURON 7.3 documentation
========================

Quick Links
-----------
- :ref:`genindex`
- Old documentation: `Quick Index <http://www.neuron.yale.edu/neuron/static/docs/help/quick_reference.html>`_ (contributed by `Mike Neubig <neubig@salk.edu>`_\ ),
  `Index <http://www.neuron.yale.edu/neuron/static/docs/help/index.html>`_\ ,
  `Contents <http://www.neuron.yale.edu/neuron/static/docs/help/hier.html>`_
- Commonly used:
    :class:`Deck`, :class:`File`, :class:`Glyph`, :class:`Graph`, :class:`GUIMath`,
    :class:`List`, :class:`Matrix`, :class:`Pointer`, :class:`PWManager`,
    :class:`Random`, :class:`StringFunctions`, :class:`SymChooser`,
    :class:`TextEditor`, :class:`Timer`, :class:`ValueFieldEditor`,
    :class:`VBox`, :class:`Vector`
    
    :class:`CVode`, :class:`FInitializeHandler`, :class:`Impedance`,
    :class:`KSChan`, :class:`LinearMechanism`, :class:`MechanismStandard`,
    :class:`MechanismType`, :class:`NetCon`, :class:`ParallelContext`,
    :class:`ParallelNetManager`, :class:`PlotShape`, :ref:`Python`,
    :class:`RangeVarPlot`, :class:`SaveState`, :class:`SectionBrowser`,
    :class:`SectionList`, :class:`SectionRef`, :class:`Shape`
    
    :ref:`panel`, :ref:`funfit`, :ref:`geometry`, :ref:`printf_doc`, :ref:`ockeywor`, :ref:`sin`,
    :ref:`nmodl2`, :ref:`nmodl`, :ref:`lw_doc`, :ref:`mech`, :ref:`predec`, :ref:`0stdrun`,
    :ref:`ocsyntax`, :ref:`topology`
    
    :ref:`neuron_rxd`,
    :func:`neuron.rxd.geometry3d.surface`, :func:`neuron.rxd.geometry3d.voxelize`


neuron.exe
----------

.. toctree::
    :maxdepth: 2

    neuron.exe/general.rst
    neuron.exe/neuron.rst


neuron
------

.. toctree::
    :maxdepth: 2

    neuron/general.rst
    neuron/neuron.rst
    neuron/stdrun.rst
    neuron/rxd.rst


NMODL
-----

.. toctree::
    :maxdepth: 2

    NMODL/ModelDescriptionLanguage.rst
    neuron/nmodl/nmodl.rst


GUI
---

.. toctree::
    :maxdepth: 2

    GUI/StandardRunTools.rst
    neuron/stdrun/0stdrun.rst
    GUI/NEURONMainMenu.rst
    neuron/agui/gui.rst
    GUI/LookAndFeel.rst


Tools
-----

.. toctree::
    :maxdepth: 2

    neuron/project/project.rst