Publications about NEURON

Efficient computation of branched nerve equations, Hines, M. L. , International journal of bio-medical computing, Volume 15, p.69–76, (1984)

A program for simulation of nerve equations with branching geometries, Hines, M. L. , International journal of bio-medical computing, Volume 24, p.55–68, (1989)

NEURON -- a program for simulation of nerve equations, Hines, Michael , In: Eeckman F.H. (eds) Neural Systems: Analysis and Modeling, Boston MA, p.127-136, (1993)

The NEURON simulation program, Hines, M. L. , Neural network simulation environments, p.147–163, (1994)

Brain organization: from molecules to parallel processing, Lytton, WW , Contemporary Behavioral Neurology, Newton, MA, p.5-28, (1997)

Dynamic interactions determine partial thalamic quiescence in a computer network model of spike-and-wave seizures, Lytton, WW, Contreras D, Destexhe A, and Steriade M , Volume 77, p.1679-1696, (1997)

The NEURON simulation environment, Hines, M. L., and Carnevale N. T. , Neural Computation, Volume 9, p.1179-1209, (1997)

The Human Brain Project: neuroinformatics tools for integrating, searching and modeling multidisciplinary neuroscience data, Shepherd, Gordon M., Mirsky Jason S., Healy Matthew D., Singer Michael S., Skoufos Emmanouil, Hines Michael S., Nadkarni Prakash M., and Miller Perry L. , Trends in neurosciences, Volume 21, p.460–468, (1998)

The neurosimulator NEURON, Hines, M. L. , Methods in Neuronal Modeling, edited by C. Koch and I. Segev. Cambridge, MA: MIT Press, p.129–136, (1998)

Expanding NEURON's repertoire of mechanisms with NMODL, Hines, M. L., and Carnevale N. T. , Neural Computation, Volume 12, p.995–1007, (2000)

NEURON: a tool for neuroscientists, Hines, M. L., and Carnevale N. T. , The Neuroscientist, Volume 7, p.123–135, (2001)

The NEURON simulation environment, The Handbook of Brain Theory and Neural Networks, Hines, M. L., and Carnevale N. T. , MIT Press, Cambridge, MA, USA, (2003)

Discrete event simulation in the NEURON environment, Hines, M. L., and Carnevale N. T. , Neurocomputing, Volume 58, p.1117–1122, (2004)

Independent variable time-step integration of individual neurons for network simulations, Lytton, William W., and Hines M. L. , Neural computation, Volume 17, p.903–921, (2005)

Recent developments in NEURON, Hines, M. L., and Carnevale N. T. , Brains, Minds and Media, Volume 1, (2005)

The NEURON Book, Carnevale, N. T., and Hines M. L. , (2006)

Parallel network simulations with NEURON, Migliore, Michele, Cannia C, Lytton William W., Markram Henry, and Hines M. L. , Journal of computational neuroscience, Volume 21, p.119–129, (2006)

Interoperability of neuroscience modeling software: current status and future directions, Cannon, Robert C., Gewaltig Marc-Oliver, Gleeson Padraig, Bhalla Upinder S., Cornelis Hugo, Hines M. L., Howell Fredrick W., Muller Eilif, Stiles Joel R., Wils Stefan, et al. , Neuroinformatics, Volume 5, p.127–138, (2007)

Model structure analysis in NEURON: toward interoperability among neural simulators, Crasto, Chiquito Joaqium, Koslow Stephen H., Hines M. L., Morse Tom M., and Carnevale N. T. , Neuroinformatics, p.91–102, (2007)

Simulation of networks of spiking neurons: a review of tools and strategies, Brette, Romain, Rudolph Michelle, Carnevale N. T., Hines M. L., Beeman David, Bower James M., Diesmann Markus, Morrison Abigail, Goodman Philip H., Harris Frederick C., et al. , Journal of computational neuroscience, Volume 23, p.349–398, (2007)

Fully implicit parallel simulation of single neurons, Hines, M. L., Markram Henry, and Schürmann Felix , Journal of computational neuroscience, Volume 25, p.439–448, (2008)

Neuron splitting in compute-bound parallel network simulations enables runtime scaling with twice as many processors, Hines, M. L., Eichner Hubert, and Schürmann Felix , Journal of computational neuroscience, Volume 25, p.203–210, (2008)

Simulation of large networks: technique and progress, Lytton, William W., Stewart Mark, and Hines M. L. , Computational neuroscience in epilepsy, Volume 1, p.3–17, (2008)

Translating network models to parallel hardware in NEURON, Hines, M. L., and Carnevale N. T. , Journal of neuroscience methods, Volume 169, p.425–455, (2008)

NEURON and Python, Hines, M. L., Davison Andrew P., and Muller Eilif , Frontiers in neuroinformatics, Volume 3, (2009)

The NEURON simulation environment in epilepsy research, Carnevale, N. T., and Hines M. L. , (2009)

Trends in programming languages for neuroscience simulations, Davison, Andrew P., Hines M. L., and Muller Eilif , Frontiers in neuroscience, Volume 3, p.36, (2009)

Optimization of applications with non-blocking neighborhood collectives via multisends on the blue gene/p supercomputer, Kumar, Sameer, Heidelberger Philip, Chen Dong, and Hines M. L. , Parallel & Distributed Processing (IPDPS), 2010 IEEE International Symposium on, (2010)

Comparison of neuronal spike exchange methods on a Blue Gene/P supercomputer, Hines, M. L., Kumar Sameer, and Schürmann Felix , Frontiers in computational neuroscience, Volume 5, p.49, (2011)

Reaction-Diffusion in the NEURON Simulator, McDougal, RA, Hines M. L., and Lytton WW , Front Neuroinform, Volume 7:28, (2013)

Simulation neurotechnologies for advancing brain research: Parallelizing large networks in NEURON, Lytton, William W., Seidenstein Alexandra, Dura-Bernal Salvador, Schurmann Felix, McDougal RA, and Hines M. L. , Neural Computation, Volume 28, p.2063-2090, (2016)

Using NEURON for Reaction-Diffusion Modeling of Extracellular Dynamics, Newton, AJH, McDougal RA, Hines M. L., and Lytton WW , Front Neuroinform, 07/2018, Volume 12, (2018)