Publications about NEURON

Using NEURON for Reaction-Diffusion Modeling of Extracellular Dynamics, Newton, AJH, McDougal RA, Hines M. L., and Lytton WW , Front Neuroinform, 07/2018, Volume 12, (2018)

Trends in programming languages for neuroscience simulations, Davison, Andrew P., Hines M. L., and Muller Eilif , Frontiers in neuroscience, Volume 3, p.36, (2009)

Translating network models to parallel hardware in NEURON, Hines, M. L., and Carnevale N. T. , Journal of neuroscience methods, Volume 169, p.425–455, (2008)

Simulation of networks of spiking neurons: a review of tools and strategies, Brette, Romain, Rudolph Michelle, Carnevale N. T., Hines M. L., Beeman David, Bower James M., Diesmann Markus, Morrison Abigail, Goodman Philip H., Harris Frederick C., et al. , Journal of computational neuroscience, Volume 23, p.349–398, (2007)

Simulation of large networks: technique and progress, Lytton, William W., Stewart Mark, and Hines M. L. , Computational neuroscience in epilepsy, Volume 1, p.3–17, (2008)

Simulation neurotechnologies for advancing brain research: Parallelizing large networks in NEURON, Lytton, William W., Seidenstein Alexandra, Dura-Bernal Salvador, Schurmann Felix, McDougal RA, and Hines M. L. , Neural Computation, Volume 28, p.2063-2090, (2016)

Recent developments in NEURON, Hines, M. L., and Carnevale N. T. , Brains, Minds and Media, Volume 1, (2005)

Reaction-Diffusion in the NEURON Simulator, McDougal, RA, Hines M. L., and Lytton WW , Front Neuroinform, Volume 7:28, (2013)

A program for simulation of nerve equations with branching geometries, Hines, M. L. , International journal of bio-medical computing, Volume 24, p.55–68, (1989)

Parallel network simulations with NEURON, Migliore, Michele, Cannia C, Lytton William W., Markram Henry, and Hines M. L. , Journal of computational neuroscience, Volume 21, p.119–129, (2006)

Optimization of applications with non-blocking neighborhood collectives via multisends on the blue gene/p supercomputer, Kumar, Sameer, Heidelberger Philip, Chen Dong, and Hines M. L. , Parallel & Distributed Processing (IPDPS), 2010 IEEE International Symposium on, (2010)

The neurosimulator NEURON, Hines, M. L. , Methods in Neuronal Modeling, edited by C. Koch and I. Segev. Cambridge, MA: MIT Press, p.129–136, (1998)

Neuron splitting in compute-bound parallel network simulations enables runtime scaling with twice as many processors, Hines, M. L., Eichner Hubert, and Schürmann Felix , Journal of computational neuroscience, Volume 25, p.203–210, (2008)

The NEURON simulation program, Hines, M. L. , Neural network simulation environments, p.147–163, (1994)

The NEURON simulation environment, The Handbook of Brain Theory and Neural Networks, Hines, M. L., and Carnevale N. T. , MIT Press, Cambridge, MA, USA, (2003)

The NEURON simulation environment in epilepsy research, Carnevale, N. T., and Hines M. L. , (2009)

The NEURON simulation environment, Hines, M. L., and Carnevale N. T. , Neural Computation, Volume 9, p.1179-1209, (1997)

The NEURON Book, Carnevale, N. T., and Hines M. L. , (2006)

NEURON and Python, Hines, M. L., Davison Andrew P., and Muller Eilif , Frontiers in neuroinformatics, Volume 3, (2009)

NEURON: a tool for neuroscientists, Hines, M. L., and Carnevale N. T. , The Neuroscientist, Volume 7, p.123–135, (2001)

NEURON -- a program for simulation of nerve equations, Hines, Michael , In: Eeckman F.H. (eds) Neural Systems: Analysis and Modeling, Boston MA, p.127-136, (1993)

Model structure analysis in NEURON: toward interoperability among neural simulators, Crasto, Chiquito Joaqium, Koslow Stephen H., Hines M. L., Morse Tom M., and Carnevale N. T. , Neuroinformatics, p.91–102, (2007)

Interoperability of neuroscience modeling software: current status and future directions, Cannon, Robert C., Gewaltig Marc-Oliver, Gleeson Padraig, Bhalla Upinder S., Cornelis Hugo, Hines M. L., Howell Fredrick W., Muller Eilif, Stiles Joel R., Wils Stefan, et al. , Neuroinformatics, Volume 5, p.127–138, (2007)

Independent variable time-step integration of individual neurons for network simulations, Lytton, William W., and Hines M. L. , Neural computation, Volume 17, p.903–921, (2005)

The Human Brain Project: neuroinformatics tools for integrating, searching and modeling multidisciplinary neuroscience data, Shepherd, Gordon M., Mirsky Jason S., Healy Matthew D., Singer Michael S., Skoufos Emmanouil, Hines Michael S., Nadkarni Prakash M., and Miller Perry L. , Trends in neurosciences, Volume 21, p.460–468, (1998)

Fully implicit parallel simulation of single neurons, Hines, M. L., Markram Henry, and Schürmann Felix , Journal of computational neuroscience, Volume 25, p.439–448, (2008)

Expanding NEURON's repertoire of mechanisms with NMODL, Hines, M. L., and Carnevale N. T. , Neural Computation, Volume 12, p.995–1007, (2000)

Efficient computation of branched nerve equations, Hines, M. L. , International journal of bio-medical computing, Volume 15, p.69–76, (1984)

Dynamic interactions determine partial thalamic quiescence in a computer network model of spike-and-wave seizures, Lytton, WW, Contreras D, Destexhe A, and Steriade M , Volume 77, p.1679-1696, (1997)

Discrete event simulation in the NEURON environment, Hines, M. L., and Carnevale N. T. , Neurocomputing, Volume 58, p.1117–1122, (2004)

Comparison of neuronal spike exchange methods on a Blue Gene/P supercomputer, Hines, M. L., Kumar Sameer, and Schürmann Felix , Frontiers in computational neuroscience, Volume 5, p.49, (2011)

Brain organization: from molecules to parallel processing, Lytton, WW , Contemporary Behavioral Neurology, Newton, MA, p.5-28, (1997)